Gene Information

Name : MDS_4415 (MDS_4415)
Accession : YP_004382198.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : malate synthase G
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : -
Position : 4836668 - 4838845 bp
Length : 2178 bp
Strand : +
Note : -

DNA sequence :
ATGACTGAACGCGTTCAAGTCGGTGACCTGCAGGTCGCCAAAGCCCTGTACGACTTCGTGAACAACGAAGCCATCCCCGG
TACCGGCATCGCTGCCGACAAGTTCTGGGCCGGTGCCGCTGCGGTCATCAAGGACCTGGCACCGAAGAACCGTGCCCTGC
TGGCCAAGCGTGACGAGCTGCAGGCGCAGATCGATGCCTGGCATCAGGCGCGCAAGGGTCAGGCTCATGACGCGGCCGCC
TACAAAGCCTTCCTCCAGGAAATCGGCTATCTGCTGCCGGAGCCGGAAGATTTCCAGGCCACCACCACCAACGTCGACGA
AGAAATCGCCCGCCTGGCAGGCCCGCAGCTGGTCGTGCCGGTGATGAACGCGCGCTTCGCCCTGAACGCCTCAAACGCCC
GCTGGGGCTCGCTGTACGATGCGCTGTACGGCACCGACGTGATCAGCGAAGAAGGCGGCGCCGAGAAGGGCAAGGGCTAC
AACAAGGTCCGTGGCGACAAGGTCATCGCATTCGCTCGCGCCTTCCTCGACGAGGCTGCACCGCTGGCTGCCGGTTCTCA
CGTCGACTCCACCGGTTATGCCATCGTCGACGGCAAGCTGGTCGTCGCCCTCAAGGGCGGCAGCAACAGCGGCCTACGTG
ACGACGCGCAGCTGGTTGGCTTCCAGGGCGAGGCCAGCGCACCGATCGCCGTGCTGCTCAAGCACAACGGCCTGCACTTC
GAAATCCAGATCGATGCCTCCAGCCCGATCGGCAGCACCGACGCCGCCGGCGTCAAAGACGTGCTGATGGAAGCCGCGCT
GACCACCATCATGGACTGCGAAGACTCCGTCGCTGCCGTCGATGCCGACGACAAGGTGGTGGTCTACAAGAACTGGCTGG
GCCTGATGAAGGGCGACCTGGCCGAGCAGGTGTCCAAGGGCGGCAGCACCTTCACCCGCACCATGAACCCGGATCGCGTC
TACACCAAGCCGGACGGTTCCGAGCTGACCCTGCATGGCCGCTCGCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAC
CAACCCGGCCATCCTCGACGCCGAAGGCAACGAGATTCCGGAAGGCATCCAGGACGCGCTATTCACCAGCCTGATTGCGG
TGCACAACCTGATCGGCAACACCACGCGCAAGAACACTCGCACCGGCAGCGTGTACATCGTCAAACCGAAGATGCACGGC
CCGGAAGAAGTCGCCTTCACCAGCGAAATCTTCGCCCGTGTCGAGGATGTGCTGGGCCTGGCCCGCAACACCCTGAAAGT
CGGCATCATGGACGAGGAGCGCCGCACCACCGTCAACCTCAAGGCGTGCATCAAGGCTGCCAGCGAGCGCGTGGTGTTCA
TCAACACCGGCTTCCTCGACCGTACCGGTGACGAGATCCACACTTCCATGGAAGCCGGCGCCGTGGTGCGCAAGGCCGCC
ATGAAGAGCGAGACCTGGATCGGCGCCTACGAGAACAACAACGTCGACGTTGGCCTGGCCACCGGCCTGCAGGGCCGCGC
GCAGATCGGCAAAGGCATGTGGGCCATGCCGGACCTGATGGCCGCCATGCTCGAGCAGAAGATCGCTCACCCGCTGTCGG
GCGCCAATACCGCCTGGGTCCCTTCGCCGACAGCCGCCACCCTGCACGCTCTGCACTACCACAAGGTCGACGTGTTCGCC
CGTCAGGCCGAACTGGCCAAGCGCACCCCGGCGTCGGTGGACGACATCCTGACCATCCCGCTGGCCAAGGACACCAACTG
GTCTGCAGAAGAAATCCGCAACGAGCTGGACAACAACGCGCAAGGCATCCTCGGCTACGTGGTGCGCTGGATCGACCAGG
GCGTCGGCTGCTCCAAGGTACCGGACATCAACGACGTCGGTCTGATGGAAGACCGTGCCACCCTGCGCATCTCCAGCCAA
CTGCTGGCCAACTGGCTGCGCCACGGCATCGTCAGCGAAGAGCAGGTGGTCGAAAGCCTCAAGCGCATGGCGCCGGTGGT
GGATCGTCAGAACGCCAATGACCCGCTGTATCGCCCCATGGCCCCGGACTTCGACAACAACGTCGCCTTCCAGGCCGCGC
TGGAGCTGGTCGTCGAAGGCACCAAGCAGCCCAACGGCTACACCGAGCCGGTGCTGCATCGCCGTCGCCGCGAGTTCAAG
GCCAAGAACGGTCTGTGA

Protein sequence :
MTERVQVGDLQVAKALYDFVNNEAIPGTGIAADKFWAGAAAVIKDLAPKNRALLAKRDELQAQIDAWHQARKGQAHDAAA
YKAFLQEIGYLLPEPEDFQATTTNVDEEIARLAGPQLVVPVMNARFALNASNARWGSLYDALYGTDVISEEGGAEKGKGY
NKVRGDKVIAFARAFLDEAAPLAAGSHVDSTGYAIVDGKLVVALKGGSNSGLRDDAQLVGFQGEASAPIAVLLKHNGLHF
EIQIDASSPIGSTDAAGVKDVLMEAALTTIMDCEDSVAAVDADDKVVVYKNWLGLMKGDLAEQVSKGGSTFTRTMNPDRV
YTKPDGSELTLHGRSLLFVRNVGHLMTNPAILDAEGNEIPEGIQDALFTSLIAVHNLIGNTTRKNTRTGSVYIVKPKMHG
PEEVAFTSEIFARVEDVLGLARNTLKVGIMDEERRTTVNLKACIKAASERVVFINTGFLDRTGDEIHTSMEAGAVVRKAA
MKSETWIGAYENNNVDVGLATGLQGRAQIGKGMWAMPDLMAAMLEQKIAHPLSGANTAWVPSPTAATLHALHYHKVDVFA
RQAELAKRTPASVDDILTIPLAKDTNWSAEEIRNELDNNAQGILGYVVRWIDQGVGCSKVPDINDVGLMEDRATLRISSQ
LLANWLRHGIVSEEQVVESLKRMAPVVDRQNANDPLYRPMAPDFDNNVAFQAALELVVEGTKQPNGYTEPVLHRRRREFK
AKNGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60