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Name : Alide2_1921 (Alide2_1921) Accession : YP_004387815.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : conjugative transfer ATPase Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 2020589 - 2023471 bp Length : 2883 bp Strand : + Note : TIGRFAM: Conjugative transfer ATPase, PFL4706; KEGG: rpf:Rpic12D_0683 hypothetical protein DNA sequence : ATGGCCTGGTCGTTGCCCTGGGCACGCAAGGCCGTCACGCCCGCCGGCCCCGACCTGGATGCCGATGACGCCTGGGCGCA GCATGTCTCCACGCTGGTCGCGCACGGCATTCCCGAGCCCGGCAGCGCGGTGGGGAGCCAGCCGCGCCCGCCGGCCACCG AAGCGGACCTGCAGGCGCTCTACGGCGTGGCACCGTCCTTCGCCGACCTGTTGCCGTGGGTGGAGTACCTGCCCGGCTCC AAGAGCATGTTGCTTGAAGACGGCCAGTCGGTTGCGGGCTTCTTCGAACTGGCCCCGGTCGGCACCGAAGGCCGTGAGAT GGCCTGGCTGTGGCAGGCACGCGATGCACTGGAGAACGCGCTGCAGGACTCGTTCGACGAACTCGACGAGAACCCGTGGG TGGTGCAGCTCTACGCCCAGGACGAATCGACCTGGGACACCTACCTGCGCGGGCTGGCCGACTATGTGCGGCCGCGCGCC CAGGGCAGCGCCTTCACGGACTTCTACCTGCGTTTCTTTGGGCACCACCTGCGCGCCATTGCCAAGCCCGGCGGGCTGTT CGAGGACACCACGGTGACGCGGCTGCCGTGGCGCGGCCAGGTCCGGCGCGTGCGAATGGTGGTCTACCGGCGCGCGAACG CTGCGACCGCATCGCGGCGCGGCCAGTCCCCCGAGCAGGCGTTGACGACGATCTGCGACCGGCTCGTGGGCGGCCTCGCC AACGCGGGCGTGAAATCCCGCCGCATGGAGGCGGCCGACATCCACGACTGGCTGCTGCGCTGGTTCAACCCGCACCCGAC GCTGCTCGGCCCCAGCGCCGACGACCGCGAGCGCTTCTATGCGCTCACGCGCTACCCCGAGGCAGTCGAAGACGGCGAGA TCGAGCTGGCCAGCGGAGACTTCGCGCAGCGCCTGTTCTTCGGCCAGCCGCGCTCGGACGTGGCGAACGGCACGTGGCTG CTCGACGGCATGCCGCACCGGGTCATCGTGATGGACCGGCTGCGCATGCCCCCCGCGACCGGACACGTCACCGGCGAGAC GCGCAAGGGCGGCGATGCGGTCAACGCGCTGTTCGACCAGATGCCCGAGGACACGGTGATGTGCCTGACCGTCGTCGCGA CGCCGCAGGACGTGCTCGAAGGGCACCTGAACCACCTGAGCAAGAAGTCGGTCGGCGAGACGCTGGCCTCGGAGCAGACG CGCCGCGACGTGCAGGAAGCGCGCGGGCTGATCGGCAGCGCGCACAAGCTCTACCGCGGCGCGCTGGCCTTCTATCTGCG CGGACGCGACCTGCCGCAGCTCGACGCGCGCGGCCTGCAACTGATCAACGTCATGCTCAACGCCGGCCTGCAGCCGGTGC GCGAGGAAGACGAGGTGGCGCCGCTCAACAGCTACCTGCGCTGGCTCCCGTGCGTGTTCGATCCGGCCACCGACAAGCGC CAGTGGTACACGCAACTGATGTTCGCGCAGCACGCCGCGAACCTCGCGCCGGTGTGGGGCCGCAGCCAGGGCACCGGCCA TCCGGGCATCACGTTCTTCAACCGCGGCGGCGGGCCGATCACCTTCGACCCGCTGAACCGGCTCGACCGGCAGATGAACG CCCACCTGTTCCTGTTCGGTCCCACCGGCTCGGGCAAGAGCGCCACGCTCAACAACATCCTGAACCAGGTGACGGCGATC TACCGGCCGCGGCTGTTCATCGTCGAGGCGGGCAACAGCTTCGGCTTGTTCGGCGACTTCGCGGCGCGGCTGGGTATGAA GGTGCATCGCGTCAAGCTGGCCCCCGGCGCCGGGGTGAGCCTCGCTCCGTTCGCCGACGCCCACCGGCTTGTCGAAACGC CCAGCCAGGTGCAGACGCTGGATGCCGACGCGCTGGACGAGGACCGCGACGAGGCGGTACAGGCAGCGGATGCCGACGAG CAGCGTGACGTGCTGGGCGAACTGGAAATCACCGCGCGGCTGATGATCACTGGCGGCGAGGACAAGGAAGAAGCGCGCAT GACGCGCGCCGACCGCAGCCTGATCCGCCAGTGCATCCTCGACGCGGCGCAGCACTGCGTGGCCGAGCAGCGCACGGTGC TCACGCGCGACGTGCGCGATGCGTTGCGCGAGCGTGCCCGCGATACGTCGCTGCCCGAGGTGCGGCGCGCGCGGCTACTG GAGATGGCGGACGCGATGGATATGTTCTGTCAGGGCGTGGACGGCGAGATGTTCGACCGGCCCGGCACGCCGTGGCCCGA GGCCGACATCACCATCGTGGACCTCGCCACCTTTGCGCGCGAGGGCTACAACGCGCAGCTCTCGATCGCCTACATCTCGC TGATCAACACGGTCAACAACATCGCCGAGCGCGACCAGTTCCTGGGTCGACCGATCATCAACGTGACGGACGAGGGCCAC ATCATCACCAAGAACCCGCTGCTCGCGCCCTACGTCGTGAAGATCACGAAGATGTGGCGCAAGCTCGGCGCCTGGTACTG GCTGGCGACGCAGAACATCGACGACCTGCCCAAGGCCGCCGAGCCCATGCTGTCGATGATCGAGTGGTGGATCTGCCTCT CCATGCCGCCGGACGAGGTGGAGAAGATTGCGCGCTTCCGCGAGCTGAACCCGGCGCAGAAGGCGCTGATGCTTTCCGCG CGCAAGGAGGCAGGCAAGTTCACCGAGGGCGTGATCCTCTCCAAGAGCATGGAGGTGCTGTTCCGTGCGGTGCCGCCCAG CCTGTACCTGGCACTGGCTCAAACCGAGCCGGAAGAGAAGGCGGAACGCTTCCAGTTGATGCAGCAGTACGGCATCGGCG AGTTGGATGCGGCTTTCAGGATCGCCGAGAAGATCGACCTCGCTCGCGGCATCGAATCGCTGGCGCTCGATGCGCTGGCG TGA Protein sequence : MAWSLPWARKAVTPAGPDLDADDAWAQHVSTLVAHGIPEPGSAVGSQPRPPATEADLQALYGVAPSFADLLPWVEYLPGS KSMLLEDGQSVAGFFELAPVGTEGREMAWLWQARDALENALQDSFDELDENPWVVQLYAQDESTWDTYLRGLADYVRPRA QGSAFTDFYLRFFGHHLRAIAKPGGLFEDTTVTRLPWRGQVRRVRMVVYRRANAATASRRGQSPEQALTTICDRLVGGLA NAGVKSRRMEAADIHDWLLRWFNPHPTLLGPSADDRERFYALTRYPEAVEDGEIELASGDFAQRLFFGQPRSDVANGTWL LDGMPHRVIVMDRLRMPPATGHVTGETRKGGDAVNALFDQMPEDTVMCLTVVATPQDVLEGHLNHLSKKSVGETLASEQT RRDVQEARGLIGSAHKLYRGALAFYLRGRDLPQLDARGLQLINVMLNAGLQPVREEDEVAPLNSYLRWLPCVFDPATDKR QWYTQLMFAQHAANLAPVWGRSQGTGHPGITFFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNILNQVTAI YRPRLFIVEAGNSFGLFGDFAARLGMKVHRVKLAPGAGVSLAPFADAHRLVETPSQVQTLDADALDEDRDEAVQAADADE QRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAQHCVAEQRTVLTRDVRDALRERARDTSLPEVRRARLL EMADAMDMFCQGVDGEMFDRPGTPWPEADITIVDLATFAREGYNAQLSIAYISLINTVNNIAERDQFLGRPIINVTDEGH IITKNPLLAPYVVKITKMWRKLGAWYWLATQNIDDLPKAAEPMLSMIEWWICLSMPPDEVEKIARFRELNPAQKALMLSA RKEAGKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERFQLMQQYGIGELDAAFRIAEKIDLARGIESLALDALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 84 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 81 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 67 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 63 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 63 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 63 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 52 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 50 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 47 |
