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Name : Alide2_2562 (Alide2_2562) Accession : YP_004388435.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : 1-deoxy-D-xylulose-5-phosphate synthase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : 2.2.1.7 Position : 2677671 - 2678675 bp Length : 1005 bp Strand : - Note : PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: lch:Lcho_4275 transketolase central region; SMART: Transketolase-like, pyrimidine-binding domain DNA sequence : ATGAACACCGCAACGCAAAAGAAGCCGCGCCTGACCACCTCGGCCATGATCGCCTCCATCGCCGACGAGGGCCAGCGCGT CAAGGCCGCGCCCTTCGGCAAGGCGCTGGTGGAATACGCGGCCACGCGGCCCGAGGTCGTCGGCATGACCGCCGATCTGG CCAAGTACACCGACCTGCACCTGTTCGCCCAGGCCTACCCCGAGCGCTTCTTCCAGATGGGCATGGCCGAGCAGCTCCTG ATGGGGGCGGCCGGCGGCATGGCCAAGACGGGCCTGGTGCCGTTCGCCACCACCTATGCCGTGTTCGGCACGCGGCGCGC CTACGACTTCATCCACCAGGTGATCGCCGAGGAGAACCTCAACGTCAAGATCTGCTGCGCGCTGCCCGGCCTCACCACGG GCTACGGCCCGAGCCACCAGGCCACCGAGGACCTGGCCATGATGCGCGCCATTCCCGGCCTGACCGTGGTCGATCCCTGC GACGCGCTGGACATCGAGCAGGCCGTGCCCCAGATCGCAGAGCATGCCGGCCCCGTCTACATGCGCCTGCTGCGCGGCAA CGTGCCCCTGGTGCTGGACGAGTACGACTACCGCTTCGAGCTCGGCAAGGCCAAGCTGCTGCGCGACGGCGCGGACGTGC TCGTGATCTCCAGCGGCCTGCTGACCATGCGCGCGCTGGAGGCGGCCCGGCAGCTTGCCGGCGACAAGGTCGGCGTGGCG GTGCTGCACTGCCCCACGATCAAGCCGCTGGATGCCGCGACCATCCTGGCCGAGGCGCGGCGCCCGGGGCGCCTCGTGGT GGTGGCGGAGAACCACTCCGCCGTGGGCGGCCTGGGCGAGGCCGTGGCCAGCCTGCTCCTGCAGGAAGGCGTGACGCCCG CGCGCTTTCGCATGCTGGCGCTGCCGGACACCTTCCTCGATGCGGGCGCTCTGCCCACGCTGCACGACCGTTACGGCATC TCCACCGCGAAGGTGGCGGAATCGCTCAAGGCCTGGCTGGCCTGA Protein sequence : MNTATQKKPRLTTSAMIASIADEGQRVKAAPFGKALVEYAATRPEVVGMTADLAKYTDLHLFAQAYPERFFQMGMAEQLL MGAAGGMAKTGLVPFATTYAVFGTRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGLTVVDPC DALDIEQAVPQIAEHAGPVYMRLLRGNVPLVLDEYDYRFELGKAKLLRDGADVLVISSGLLTMRALEAARQLAGDKVGVA VLHCPTIKPLDAATILAEARRPGRLVVVAENHSAVGGLGEAVASLLLQEGVTPARFRMLALPDTFLDAGALPTLHDRYGI STAKVAESLKAWLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 6e-119 | 75 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 2e-119 | 75 |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 1e-101 | 75 |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 1e-87 | 74 |
