Gene Information

Name : Alide2_4571 (Alide2_4571)
Accession : YP_004390390.1
Strain : Alicycliphilus denitrificans K601
Genome accession: NC_015422
Putative virulence/resistance : Unknown
Product : protein-export membrane protein SecF
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG0341
EC number : -
Position : 4793336 - 4794289 bp
Length : 954 bp
Strand : -
Note : KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal

DNA sequence :
ATGGAATTTTTCCGCATCAAAAAAGACATCCCGTTCATGAAGTACGCGTTGGTGCTCAACGCGGTGTCCTTCATCACCTT
CGCCCTGGCGGTATTCTTCCTGGTCACGCGCGGCCTGCACCTGTCGGTGGAGTTCACCGGCGGCACCGTCATGGAGGTGG
CCTACGCGCAGACCGCCGACATCGGCAAGGTGCGCGACAAGGTGGCGGCGCTGGGCTATCCCGACGTGGTGGTGCAGAAC
TTCGGCACCTCGCGCGACGTGATGATCCGCCTGCCCGTGCAGAAGGGCGTGACCTCGGCCCAGCAGAGCGAGCAGGTGCT
GGCCGCGCTCAAGAGCGAGGATCCGGGCGTCACGCTGCGGCGCACCGAGTTCGTCGGCCCGCAGGTCGGCGAGGAACTGG
TGCACGGCGGCCTCATGGCGCTGGGCATGGTGGTGCTGGGCATCGTGATCTACCTGGCCCTGCGCTTCGAGTGGAAGTTC
GGCGTCGCGGCCATCATCGCCAACCTGCACGACGTGGTCATCATCCTGGGCTTCTTCGCGTTCTTCCAGTGGGAGTTCTC
GCTCTCGGTGCTCGCGGGCGTGCTGGCGGTGCTGGGCTACTCGGTCAACGAGTCGGTCGTGATCTTCGACCGGATCCGCG
AGGCCTTCCGCAAGTTCCGCAAGCTCAATACGCACGAGGTGATCGACCACGCCATCACCTCGACGATGAGCCGCACCATC
ATCACCCACGCCTCGACCGAGGCCATGGTGCTCTCGATGTTCTTCTTCGGCGGCCCCAGCCTGCACTACTTCGCGCTGGC
GCTGACCATCGGCATCCTATTCGGCATCTATTCCTCGGTGTTCGTGGCCGCGGCCATCGCCATGTGGCTGGGCGTCAAGC
GCGAGGATCTGGTCAAGGCCTCCGCGCGCAAGGAGGAAGACCCCAACGACCCCAACTCGGGAGCCGTTGTGTGA

Protein sequence :
MEFFRIKKDIPFMKYALVLNAVSFITFALAVFFLVTRGLHLSVEFTGGTVMEVAYAQTADIGKVRDKVAALGYPDVVVQN
FGTSRDVMIRLPVQKGVTSAQQSEQVLAALKSEDPGVTLRRTEFVGPQVGEELVHGGLMALGMVVLGIVIYLALRFEWKF
GVAAIIANLHDVVIILGFFAFFQWEFSLSVLAGVLAVLGYSVNESVVIFDRIREAFRKFRKLNTHEVIDHAITSTMSRTI
ITHASTEAMVLSMFFFGGPSLHYFALALTIGILFGIYSSVFVAAAIAMWLGVKREDLVKASARKEEDPNDPNSGAVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
secF AAT96102.1 SecF Not tested T-PAI Protein 2e-47 43
secF AAT96066.1 SecF Not tested T-PAI Protein 2e-47 43