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Name : Alide2_4572 (Alide2_4572) Accession : YP_004390391.1 Strain : Alicycliphilus denitrificans K601 Genome accession: NC_015422 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 4794301 - 4796196 bp Length : 1896 bp Strand : - Note : KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-termina DNA sequence : ATGAACCGTTACCCGGTCTGGAAGTACGCGATCCTGGTGATCGCGTTGCTCATAGGGGCCTTGTACACCCTGCCCAATTT CTTCGGCGAGGCGCCTGCCGTGCAGGTGTCCTCGGCCAAGGCCACGATCAAGGTCGATGGCGCGCTGCAGCGGCGCGTCG AGGAGGTGCTCCAGTCGGCCGGGGTGAGCCCGGACTCGGTGGTGTTCGACGGCCACTCGGTGCGCGCGCGCTTCGATACA CCGGACAATCAGCTCAAGGCCAAGGACGCGATCGAGAAGGCGCTGGTCCCCGACCCGTCCGACCCGCCCTACATCGTCGC GCTTAACCTCGTGTCGCGCTCGCCCGACTGGCTGACCGCGATCAACGCACGCCCCATGTACCTGGGGCTGGACCTGCGCG GCGGCGTGCACTTCATGCTGCAGGTGGACATGCAGGCGGCCATCACCAAGAAGGCTGAGTCCTATGCCGGCGACCTGCGT ACCGCCCTGCGCGAGAAGAACATCCGCCACGGTGGCATCAGCCGCGACGGCCAGGCCGTGGACATCCGCGTGCGCGACGA GGCCACGGCCACGGCGGCGCGCAACCTGGTCGCCGACCAGTTCCCCGACCTCGTGGTCGCGAGCAGCCCCGATGGCGAGG GCCTGAGGCTGCGCGCCACGATCAAGCCCGAGGCCCTGCGCAAGGTGCAGGAGCAGGCGCTCAAGCAGAACATGGTCACG CTGCACAACCGCATCAACGAGCTCGGCGTGGCCGAGCCCGTGATCCAGCAGCAGGGGCTGGACCGCATCGTCGTGCAGCT GCCCGGCGTGCAGGACACGGCCAAGGCCAAGGACATCCTGGGCCGCACCGCCACGCTGGAGGTGCGCATGGTGGACGAGG GCACCGAGGCACGCGCCGCCGAGATGGGCACCGGCCCCGTGCCCTTCGGCGACGAGAAATACCTGGACCGCAACGGCCAG GCCGTGATCGTCAAGAAGCAGGTCATCCTCACGGGCGAGAACCTGACCGACGCCCAGCCCGGCTTCGACGGCCAGACCCA GGAGCCCACCGTGAACCTCACGCTGGACGCCAAGGGCTCGCGCATCTTCAAGGACGTGACGCGCGAGAACATCGGCAAGC GCATGGCCATCGTGCTGTTCGAGAAGGGCAAGGGCGAGGTCGTCACGGCCCCGGTGATCCGCAGCGAGATCGGCGGCGGG CGCGTGCAGATCTCGGGCCGCATGACCACCACCGAGGCCAACGACACGGCCCTGCTGCTGCGCGCCGGGTCGCTCGCCGC GCCCATGGAGATCATCGAGGAATACACCATCGGCCCGAGCCTGGGCGCGGACAACATCGCGCGCGGCATCCACAGCGTGG TCTGGGGCATGGCGGCGATCGCGGCCTTCATGTGCGTGTACTACGTGCTGTTCGGCGTGTTCTCCACCATCGCGCTCTCG GTGAACGTGCTGATGCTCATCGCCGTGCTGTCCATGCTGCAGGCCACGCTCACGCTGCCAGGCATCGCCGCCATGGCGCT GGCGCTGGGCGTGGCGATCGACTCCAACGTGCTGATCAACGAACGCATCCGCGAGGAACTGCGCGCGGGCGTGGCGCCGC AGGCGGCGATCGCCGCGGGCTACGAGCGCGCCTGGGCCACCATCCTGGACTCCAACGTCACCACGCTGATCGCGGGCCTG GCGCTGCTGGCCTTCGGCACGGGGCCGGTGCGCGGCTTCGCCGTGGTGCACTGCATCGGCATCCTGACCAGCATGTTCTC GGCCGTGTTCTTCTCGCGCGGCCTGGTCAACCTCTGGTATGGCCGCAAGAAGAAGCTCAAGAGCGTGGCCATCGGCCAGG TGTGGAAGCCCGAGGACGCGAGCGAGCTGCGCTCCGTGGCTGGCCGTAGTAACTAG Protein sequence : MNRYPVWKYAILVIALLIGALYTLPNFFGEAPAVQVSSAKATIKVDGALQRRVEEVLQSAGVSPDSVVFDGHSVRARFDT PDNQLKAKDAIEKALVPDPSDPPYIVALNLVSRSPDWLTAINARPMYLGLDLRGGVHFMLQVDMQAAITKKAESYAGDLR TALREKNIRHGGISRDGQAVDIRVRDEATATAARNLVADQFPDLVVASSPDGEGLRLRATIKPEALRKVQEQALKQNMVT LHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKDILGRTATLEVRMVDEGTEARAAEMGTGPVPFGDEKYLDRNGQ AVIVKKQVILTGENLTDAQPGFDGQTQEPTVNLTLDAKGSRIFKDVTRENIGKRMAIVLFEKGKGEVVTAPVIRSEIGGG RVQISGRMTTTEANDTALLLRAGSLAAPMEIIEEYTIGPSLGADNIARGIHSVVWGMAAIAAFMCVYYVLFGVFSTIALS VNVLMLIAVLSMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRAGVAPQAAIAAGYERAWATILDSNVTTLIAGL ALLAFGTGPVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGRKKKLKSVAIGQVWKPEDASELRSVAGRSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 41 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-100 | 41 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-99 | 41 |
