Gene Information

Name : Lbuc_R0064 (Lbuc_R0064)
Accession : -
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1597799 - 1599360 bp
Length : 1562 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGCGTCTCCGTTGATGATTTC
AGGTGCTTGCACCTGAAAGATTTAACATTGAGACGAGTGGCGAACTGGTGAGTAACACGTGGGTAACCTGCCCTTGAAGT
AGGGGATAACACTTGGAAACAGGTGCTAATACCGTATAACAACCAAAACCACCTGTTTTGGTTTAAAAGACGGCTTCGGC
TGTCACTTTAGGATGGACCCGCGGCGTATTAGCTTGTTGGTAAGGTAACGGCTTACCAAGGCGATGATACGTAGCCGACC
TGAGAGGGTAATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAAT
GGACGAAAGTCTGATGGAGCAACGCCGCGTGAGTGATGAAGGGTTTCGGCTCGTAAAACTCTGTTGTTGGAGAAGAACAG
GTGTCAGAGTAACTGTTGACATCTTGACGGTATCCAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATA
CGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTTTTAGGTCTGATGTGAAAGCCTTC
GGCTTAACCGGAGAAGTGCATCGGAAACCGGGAGACTTGAGTGCAGAAGAGGACAGTGGAACTCCATGTGTAGCGGTGAA
ATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTGTCTGGTCTGTAACTGACGCTGAGGCTCGAAAGCATGGG
TAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTTGGAGGGTTTCCGCCCTTCAGT
GCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGC
ACAAGCGGTGGAGCATGTGGTTTAATTCGATGCTACGCGAAGAACCTTACCAGGTCTTGACATCTTCTGCCAACCTAAGA
GATTAGGCGTTCCCTTCGGGGACAGAATGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAG
TCCCGCAACGAGCGCAACCCTTATTGTTAGTTGCCAGCATTCAGTTGGGCACTCTAGCAAGACTGCCGGTGACAAACCGG
AGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAG
TCGCGAAACCGCGAGGTCAAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGT
TGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATG
AGAGTTTGTAACACCCAAAGCCGGTGAGGTAACCTTCGGGGACCAGCCGTCTAAGGTGGGACAGATGATTAGGGTGAAGT
CGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-231 81.1
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-231 81.1
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-230 80.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-230 80.8