Gene Information

Name : Lbuc_R0081 (Lbuc_R0081)
Accession : -
Strain : Lactobacillus buchneri NRRL B-30929
Genome accession: NC_015428
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2300479 - 2302041 bp
Length : 1563 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr 22, 2007

DNA sequence :
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGCGTCTCCGTTAATGATTTT
AAGTGCTTGCACTTGAAAGATTTAACATTGAGACGAGTGGCGAACTGGTGAGTAACACGTGGGTAACCTGCCCTTGAAGT
AGGGGATAACACTTGGAAACAGGTGCTAATACCGTATAACAACCAAAACCACCTGGTTTTGGTTTAAAAGACGGCTTCGG
CTGTCACTTTAGGATGGACCCGCGGCGTATTAGCTTGTTGGTAAGGTAACGGCCTACCAAGGCGATGATACGTAGCCGAC
CTGAGAGGGTAATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAA
TGGACGAAAGTCTGATGGAGCAACGCCGCGTGAGTGATGAAGGGTTTCGGCTCGTAAAACTCTGTTGTTGGAGAAGAACA
GGTGTCAGAGTAACTGTTGACATCTTGACGGTATCCAACCAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAAT
ACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTTTTAGGTCTGATGTGAAAGCCTT
CGGCTTAACCGGAGAAGTGCATCGGAAACCGGGAGACTTGAGTGCAGAAGAGGACAGTGGAACTCCATGTGTAGCGGTGA
AATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTGTCTGGTCTGTAACTGACGCTGAGGCTCGAAAGCATGG
GTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTTGGAGGGTTTCCGCCCTTCAG
TGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCG
CACAAGCGGTGGAGCATGTGGTTTAATTCGATGCTACGCGAAGAACCTTACCAGGTCTTGACATCTTCTGCCAACCTAAG
AGATTAGGCGTTCCCTTCGGGGACAGAATGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAA
GTCCCGCAACGAGCGCAACCCTTATTGTTAGTTGCCAGCATTCAGTTGGGCACTCTAGCAAGACTGCCGGTGACAAACCG
GAGGAAGGTGGGGATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGA
GTCGCGAAACCGCGAGGTCAAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAG
TTGGAATCGCTAGTAATCGTGGATCAGCATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCAT
GAGAGTTTGTAACACCCAAAGCCGGTGAGGTAACCTTCGGGGACCAGCCGTCTAAGGTGGGACAGATGATTAGGGTGAAG
TCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-230 83.9
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-231 81.1
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-231 81.1
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-230 80.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-230 80.8