Gene Information

Name : VAB18032_17810 (VAB18032_17810)
Accession : YP_004405264.1
Strain : Verrucosispora maris AB-18-032
Genome accession: NC_015434
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 2908160 - 2908486 bp
Length : 327 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence :
ATGCCTTCTGACATCGCCATCGGCATCGTCGAGACCCGGGGCGTGGTGGCCCTGTCCGCCGGGATCGAAGCCATGATCAA
GACTGCGGACGTACGCTGCATCGCCGTGGAGCGGGTGACCAGCGGTTACCTTGCCGCCGCCGTGCAGGGCACCCTCGCCG
CCGTCCGGCAGGCCGTGGCCGCCGGCGAGGCCGCCATCCGGCAGCACGGCGAGCTGCGCAGCTCGCAGGTGTACCCCAAG
CCGCATCCCACCACGGCGGCGCTGCTGGAGGACCCGGAGGCCGCCCGCATCCGCGAGGTCATGGCAAGCCTGCGGGGAGA
CGGCTGA

Protein sequence :
MPSDIAIGIVETRGVVALSAGIEAMIKTADVRCIAVERVTSGYLAAAVQGTLAAVRQAVAAGEAAIRQHGELRSSQVYPK
PHPTTAALLEDPEAARIREVMASLRGDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 0.048 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VAB18032_17810 YP_004405264.1 microcompartments protein VFG1596 Protein 0.020 43