|
Name : Spico_0603 (Spico_0603) Accession : YP_004411213.1 Strain : Sphaerochaeta coccoides DSM 17374 Genome accession: NC_015436 Putative virulence/resistance : Unknown Product : tRNA-guanine transglycosylase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : - Position : 696487 - 697626 bp Length : 1140 bp Strand : + Note : COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: ssm:Spirs_2037 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transgl DNA sequence : ATGTCACATCCAATCCATACTGTCACTCATATTGATGCAGGGTCCCATGCTCGTTGCGGACTTCTTTCTCTCCCTCACGG AACCATCGAGACTCCTGCATTCATGCCGGTCGGTACTAACGGGACGGTGAAGGGAATCTATCATGAGAAAGTAGAACAGA TGGGGTATCGTTTGATTCTCGGCAATACGTATCATCTGTACTTGCGTCCAGGCTGCGATGTCCTGGAGAGCTTCGGCGGC TTACATGCGTTTTCTTCATGGAAACATAACATCCTTACCGATAGCGGTGGTTTCCAGGTGTTTTCCCTGTCAAAACTCAG GAAGATCAAAGATGCCGGCGTTACGTTCCAGAGTCATATTGATGGAAGCCGACATGCATTTACTCCGGAGAAAGTCGTTG ATATCCAGACGATTATCGGCAGCGACATTGCAATGGTGTTGGATGTCTGCACACCCCCTGACATTGACTATCGGGCAGCA CAGGAAGCGTGGAGGGTCACGAAGCTGTGGGCAGAACGGTCCTTGATCCGACGTGATGAGAATGGCGAAAAGTTTCGCGG ATGTCTGTTTGGTATCGTCCAAGGGAATTTTTTCAAGGAACTCCGTAAAGAAAGCGCTGAAACAATCAGCGCGATGGATT TTCCCGGCATTGCCATCGGAGGACTTTCCGTAGGTGAGACACCCGACCGGTTTTCTGACTTTCTTGCTTATACCACTGAA ATGGTGACTCCTGAAAAACCCCGCTACGTAATGGGCATCGGTAGTCCCGACTATATTCTTGATGCTGTTGCCAATGGTAT AGATCTTTTCGATTGTGTCCTTGCCACCCGTACAGCCCGACATGGTCTTCTTTTTTCAGATGATGGTCCTGTGAACATCA CCAAGGCCATCCATGAGTTCAGTAGCGAACCAGTCGAGCCAACGTGTGGATGTACTGCCTGCACACAATATTCCCGTGGA TACATACGCCATTTATTCAAGGCGGGGGAGATGCTCGGTCCCATGCTGGCAACTGAACATAACCTTATGTATCTCCATAC GTTGATGGAACGCATCAAGAATGCCATCAAAAATAATTCTTTTTCCGTGTTCCGAAAGGAATACCTTGCCCGTTATTACG GGGAAAAGAAAAATGTCTGA Protein sequence : MSHPIHTVTHIDAGSHARCGLLSLPHGTIETPAFMPVGTNGTVKGIYHEKVEQMGYRLILGNTYHLYLRPGCDVLESFGG LHAFSSWKHNILTDSGGFQVFSLSKLRKIKDAGVTFQSHIDGSRHAFTPEKVVDIQTIIGSDIAMVLDVCTPPDIDYRAA QEAWRVTKLWAERSLIRRDENGEKFRGCLFGIVQGNFFKELRKESAETISAMDFPGIAIGGLSVGETPDRFSDFLAYTTE MVTPEKPRYVMGIGSPDYILDAVANGIDLFDCVLATRTARHGLLFSDDGPVNITKAIHEFSSEPVEPTCGCTACTQYSRG YIRHLFKAGEMLGPMLATEHNLMYLHTLMERIKNAIKNNSFSVFRKEYLARYYGEKKNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 3e-78 | 46 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 3e-78 | 46 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 3e-78 | 46 |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 2e-78 | 46 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 2e-78 | 46 |
