Gene Information

Name : UMN179_01926 (UMN179_01926)
Accession : YP_004420838.1
Strain : Gallibacterium anatis UMN179
Genome accession: NC_015460
Putative virulence/resistance : Virulence
Product : lipid transporter ATP-binding/permease
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 2080216 - 2082327 bp
Length : 2112 bp
Strand : +
Note : -

DNA sequence :
ATGAATAATGCGTTAGCTGCATTAGTAATTTTGGCTCGTTATCATGGGATAGCTGTCAATGCAGACGATATTACTCATCA
ATTTGATCCCGATAATACAGGATTAGATTTAACTCGTTGGCAGTTAGCTGCACGATCATTAGGATTACAAGTTAAAGCAT
TAAATAAATCAGTTGATAGATTAGGATATATGCATTTACCCGTTCTCGTTTGGGATGAAAATGAAAGACAACATTTTATT
TTAGCGAAAATGGATAAACAGAAAGATAAATATCTTATTCATGATTTAACAAAAGGCGAGCCTTGTGTGTTGACAGCGGG
AGAATTTAGTGAACGTTATACAGGAAAAATTATTGCACTAACTTCACGGGTCTCAGTGTTAGGTGCATTAGCCAAATTTG
ATTTTACTTGGTTTATTCCGGCTATTATTAAATATCGCAAGATTTTCACTGAGGTTATTGTTGTTTCTTTGGTGATACAG
ATTATTGCGCTCATTACACCTTTATTTTTTCAGGTTGTGATGGACAAAGTTTTAGTTCATCAAGGTTTCAGTACCCTTAA
TGTAATTTCGATAGCTTTATGTATTGTGGTTATTTTTGAAATCCTCTTAGGTGGAATGAGAACCTATATTTTTGCACATA
CAACAAGCAGAATCGATGTAGAACTGGGAGCAAAATTATTTCGACATTTACTAGCTTTGCCACTTGCATACTTTGAAGCT
AGACGAGTGGGAGATACGGTTGCTCGAGTAAGAGAGTTAGAACAAATACGACAATTTTTGACTGGGCAGGCATTAACGTC
AGTGCTTGATCTTTGTTTTTCAATCGTGTTTTTAACTGTCATGTGGTTCTATAGTCATTGGCTTACGTTAGTCGTTCTGA
TTTCATTGCCTTGTTATATTTTATGGTCAATTCTGATTACGCCTATTTTACGTAAACGATTGGATGAAAAGTTTGCACGA
AATGCAGATAATCAGTCTTTTTTAGTTGAATCAGTAACAGCAATGAATACTGTTAAATCTATGGCTATATCACCACAGAT
GATTAACCATTGGGATAAGCAGCTTGCGAGTTATGTCACAGCAGGACTTAAAGTGACAAAAATTGCTACAATTGGACAAC
AAGGTGTACAACTAATCCAGAAATTAGTGATGGTGATTAATTTATGGTTAGGTGCTCATTTAGTGATTAGTGGTGATTTA
AGTATTGGCCAGTTAATTGCGTTTAATATGCTTGCCGGTCAAGTAACTACGCCTGTCATTCGGTTAGCTCAATTGTGGCA
AGATTTTCAACAAGTGGGTATTTCTGTAGAGCGACTAGGGGATATTTTAAATACACCAACTGAAAATCCAAAAAGTAAAA
TTGCTTTACCTTCTATTCGAGGGGATATTGAATTTCAACAAGTACATTTTAAATATCGCCCAGAGGGTAATGAAATTTTA
TCCGATGTTTCTTTTTCCATTAAAGCAGGACAAGTCATTGGGATTGTGGGGAGATCAGGATCTGGAAAAAGCACAATCGC
CAGATTAATTCAGCGACTATATATTCCCGCTCATGGTCAAATCTTAATTGATAAACAAGATATTTCTCTTGTTTCACCAG
ATTGGTTACGTCGTCAAATTGGCGTAGTATTACAGGAAAATGTGTTATTAAATCGTAGTATTCGTGACAATATTGCTATT
GCACAACCAGGTATTGCCATTGAACAAGTCATTCAGGCAGCTAAATTAGCTGGAGCTGATGAGTTTATTTCCACTCTACC
ACAAGGATACGATACGATTATTGGCGAGCAAGGTGCCGGCCTTTCAGGTGGACAACGGCAACGAATTGCAATAGCAAGAG
CACTTATTACCAATCCACGGATCCTAATTTTTGATGAAGCAACTAGTGCATTGGATTATGAGTCAGAACGTATTTTGATG
AAAAATATGAAAGCCATTTGTCATGGTAGAACAGTCATCATTATTGCACACAGATTGTCCACCGTCAGAGATGCGGATGC
GATTTTTGTTATGGAGAAAGGCAAATTAATTGAAAGAGGTAGTCATGATGAACTACTGGCCCAAGATAAAAGTTTTTATC
ACTATTTAAATCAACTTCAAACGAGGCAGTAG

Protein sequence :
MNNALAALVILARYHGIAVNADDITHQFDPDNTGLDLTRWQLAARSLGLQVKALNKSVDRLGYMHLPVLVWDENERQHFI
LAKMDKQKDKYLIHDLTKGEPCVLTAGEFSERYTGKIIALTSRVSVLGALAKFDFTWFIPAIIKYRKIFTEVIVVSLVIQ
IIALITPLFFQVVMDKVLVHQGFSTLNVISIALCIVVIFEILLGGMRTYIFAHTTSRIDVELGAKLFRHLLALPLAYFEA
RRVGDTVARVRELEQIRQFLTGQALTSVLDLCFSIVFLTVMWFYSHWLTLVVLISLPCYILWSILITPILRKRLDEKFAR
NADNQSFLVESVTAMNTVKSMAISPQMINHWDKQLASYVTAGLKVTKIATIGQQGVQLIQKLVMVINLWLGAHLVISGDL
SIGQLIAFNMLAGQVTTPVIRLAQLWQDFQQVGISVERLGDILNTPTENPKSKIALPSIRGDIEFQQVHFKYRPEGNEIL
SDVSFSIKAGQVIGIVGRSGSGKSTIARLIQRLYIPAHGQILIDKQDISLVSPDWLRRQIGVVLQENVLLNRSIRDNIAI
AQPGIAIEQVIQAAKLAGADEFISTLPQGYDTIIGEQGAGLSGGQRQRIAIARALITNPRILIFDEATSALDYESERILM
KNMKAICHGRTVIIIAHRLSTVRDADAIFVMEKGKLIERGSHDELLAQDKSFYHYLNQLQTRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 71
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 71
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UMN179_01926 YP_004420838.1 lipid transporter ATP-binding/permease VFG1501 Protein 0.0 71
UMN179_01926 YP_004420838.1 lipid transporter ATP-binding/permease VFG0907 Protein 0.0 71
UMN179_01926 YP_004420838.1 lipid transporter ATP-binding/permease VFG1557 Protein 0.0 71
UMN179_01926 YP_004420838.1 lipid transporter ATP-binding/permease VFG0841 Protein 0.0 65
UMN179_01926 YP_004420838.1 lipid transporter ATP-binding/permease VFG1269 Protein 0.0 55