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Name : UMN179_00450 (UMN179_00450) Accession : YP_004419383.1 Strain : Gallibacterium anatis UMN179 Genome accession: NC_015460 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 459124 - 460935 bp Length : 1812 bp Strand : + Note : - DNA sequence : ATGGTGATCTTCGTTGTCGTCATCGGCATTTTATATGCGCTTCCAAATCTTTACGGTGAAGACCCGGCAGTTCAGGTTTC AGGAACGCGCGGTCAACTTGCCACCGAACAAACCTTATCCGACGTTCGTCAGGTACTTGAACAAAATAAACTTCCTATTA AATCTATCGCCTTAGAAAACGGCTCTATTTTGGCAAAATTTACCAGCACTGATGAGCAGCTTCTCGCCAAAGATAAAATT TTAGAAAAACTGGGCGATAACTATTCCGTTGCATTAAACCTTGCGCCGGCAACGCCGACTTGGTTGACTGATATCGGCGC CGGCCCAATGAAATTAGGCTTGGATTTACGTGGCGGTGTGCGTTTCTTAATGGAAGTTGACTTAAAATCGGTGCTGGCTA AACAGCAAGAACAGTTACAAGATTCTCTCCGCACCGAATTGCGTAAAGAAAAATTTGTCTATAAAGCAATCCAATCCGGT GAAAATTACTCCACCGTTATCACCCTTGCCGATAATATTTCACCAAGTGATGTGGTGCGTGTATTAAAGCGTAAACACGC TAATTGGGATGTGGTCAGCAATGGGCAAAATGTTACATTAACCCTTTCAGAAAATGAACTGACTCGTTTAAGAAAGAGTG CCGTTGAACAAAATATCACTATTTTACGTAAACGTGTGAATGAACTTGGTGTTGCTGAACCTGTGGTGCAACAGCAGGGA GCAGATCGAATCGTAGTGGAATTACCGGGGGTACAGGATACTGCTCGTGCTAAGGAAATTTTAGGCGCAACTGCAACATT GGAATTCCGTATGGTCAATCAAACCGCCAATCTTGCAGCCGCTGAAAATGGAATGGTGCCGTCCGATTCAGAATTACAAC ACGACCGTAACGGTACACCGGTTGTTGTTTATCGTAAAACCATTTTAGGTGGTGAGCATATTACCGATGCCAATTCCGGT AATGATGAATATGGTCGTCCTCAAGTAAATATCTCTTTGGACAGCGAAGGCGGAAATATGATGTCGGAAGCGACTAAAAC CGCAATCGGTAAACCAATGGCGACTGTTTATAGTGAATATAAAGACAGCGGTAAAAAAGATGAAAACGGTAAAGCAATTT TGACAAAACACGAAGAAGTCATTAACGTTGCTACCATTCAATCTCGTTTAGGCAATACTTTCCGTATTACCGGCATCAAC TCCCCTGCTGAAGCGCAAAATCTTTCCGTGTTATTACGTTCAGGTGCATTAATTGCTCCGATTCAGATTGTTGAAGAACG CACTATTGGACCTTCTCTTGGGGCGCAAAATATCGAACAGGGTATGCAGGCAAGCTTCTGGGGCTTATTGATCGTGGTGC TCTTTATGGCGCTTTACTACCGTAAATTCGGTTTGATCGCTAATTTGGCATTGGTTGCCAACATCGTTATTCTGGTCGGT TTGATGTCATTAATTCCGGGGGCAACGCTATCTATGCCGGGCATTGCAGGGATCGTGCTGTCGGTCGGGATGTCGGTCGA TGCCAACGTGTTGATCTTTGAGCGTATTAAAGAAGAGTTGCGTAACGGCCGTTCGGTACAACAAGCCATTAACGAAGGTT ACAGCGGTGCCTTCTCCAGTATTTTCGATGCTAACCTGACAACTATTTTAACGGCTGTCATTCTTTATGCAGTAGGTAGC GGCCCGGTAAAAGGCTTCGCGATTACATTATCTCTTGGTGTTGCCATTTCGATGTTTACTGCCATTACCGGTACTCGTGC GGTGGTGAATTTCCTCTATGGTGGAAAACGAATCAGTAAATTATCGATTTAA Protein sequence : MVIFVVVIGILYALPNLYGEDPAVQVSGTRGQLATEQTLSDVRQVLEQNKLPIKSIALENGSILAKFTSTDEQLLAKDKI LEKLGDNYSVALNLAPATPTWLTDIGAGPMKLGLDLRGGVRFLMEVDLKSVLAKQQEQLQDSLRTELRKEKFVYKAIQSG ENYSTVITLADNISPSDVVRVLKRKHANWDVVSNGQNVTLTLSENELTRLRKSAVEQNITILRKRVNELGVAEPVVQQQG ADRIVVELPGVQDTARAKEILGATATLEFRMVNQTANLAAAENGMVPSDSELQHDRNGTPVVVYRKTILGGEHITDANSG NDEYGRPQVNISLDSEGGNMMSEATKTAIGKPMATVYSEYKDSGKKDENGKAILTKHEEVINVATIQSRLGNTFRITGIN SPAEAQNLSVLLRSGALIAPIQIVEERTIGPSLGAQNIEQGMQASFWGLLIVVLFMALYYRKFGLIANLALVANIVILVG LMSLIPGATLSMPGIAGIVLSVGMSVDANVLIFERIKEELRNGRSVQQAINEGYSGAFSSIFDANLTTILTAVILYAVGS GPVKGFAITLSLGVAISMFTAITGTRAVVNFLYGGKRISKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 46 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 46 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 46 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 46 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 46 |
