Gene Information

Name : Krodi_1954 (Krodi_1954)
Accession : YP_004431205.1
Strain : Krokinobacter sp. 4H-3-7-5
Genome accession: NC_015496
Putative virulence/resistance : Unknown
Product : Transketolase central region
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : -
Position : 2209455 - 2210408 bp
Length : 954 bp
Strand : -
Note : PFAM: Transketolase central region; Transketolase domain-containing protein; KEGG: cat:CA2559_00875 transketolase, C-terminal subunit

DNA sequence :
ATGAAAACATACGAAAATACAGGCAGTAAGGATACAAGATCAGGTTTTGGAGCAGGAATGACAGAATTAGGGAGAACAAA
TCCTAATGTTGTTTCTCTCTGTGCAGATCTTATAGGTTCTCTAAAAATACAAACGTTTATAGATGAAAATCCAGAACGTT
TTTTCCAAATAGGAATTGCCGAAGCAAATATGATGGGTATCGCCGCAGGACTAACAATAGGTGGTAAAATTCCTTTCACA
GGAACTTTTGCAAACTTCTCTACGGGTCGTGTTTATGACCAGATTAGACAGTCTATCGCATATTCTGACAAAAATGTAAA
AATATGTGCATCTCACGCAGGTCTTACCTTAGGTGAAGATGGAGCCACACACCAAATTCTTGAGGACATCGGACTCATGA
AGATGTTACCAGGAATGACAGTGATCAATACGTGTGATTATAACCAGACCAAAGCTGCGACTATAGCACTTGCAGATCAC
GTAGGGCCAGTTTATTTACGTTTTGGACGTCCGGTAGTGCCTAACTTCACTCCTGAAAATCAAAAATTTGAAATAGGGAA
AGCAGTACAATTACAAGAAGGTAATGATGTAACTATTGTTGCGACTGGCCACCTAGTATGGGAAGCGCTTGAGGCTTGCA
AAGTACTTAATGAAAAAGGCATCACAGCAGAAGTAATCAATATACACACTATCAAACCTCTAGATGCAGAGGCAATCATC
AAATCTGTAAAAAAGACTGGATGCGTGGTAACTGCAGAGGAGCATAACTTTTTAGGAGGTCTAGGAGAAAGTGTAGCAAG
AGAGCTATCTCTTACCCACCCTGTACCACAAGAGTACGTTGCGACAGCAGATACATTTGGAGAAAGTGGGACGCCAGAAC
AACTTATGGAAAAATACGGGCTTAATGCAGATGCTATCGTAAAGGCTGTAGAAAAAGTAGTTGCTAGAAAATAA

Protein sequence :
MKTYENTGSKDTRSGFGAGMTELGRTNPNVVSLCADLIGSLKIQTFIDENPERFFQIGIAEANMMGIAAGLTIGGKIPFT
GTFANFSTGRVYDQIRQSIAYSDKNVKICASHAGLTLGEDGATHQILEDIGLMKMLPGMTVINTCDYNQTKAATIALADH
VGPVYLRFGRPVVPNFTPENQKFEIGKAVQLQEGNDVTIVATGHLVWEALEACKVLNEKGITAEVINIHTIKPLDAEAII
KSVKKTGCVVTAEEHNFLGGLGESVARELSLTHPVPQEYVATADTFGESGTPEQLMEKYGLNADAIVKAVEKVVARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 3e-41 41