Gene Information

Name : Glaag_1962 (Glaag_1962)
Accession : YP_004434175.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2286825 - 2287562 bp
Length : 738 bp
Strand : -
Note : KEGG: pat:Patl_2406 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGTTAACGATGAAAGACATTAAAAAGATTTACCGTACGGATTCAATCGAAACCCACGCACTACGAGATTTCAACTTACA
CGTAAACGAAGGCGATTTTGTCGCGGTCACCGGGCCTTCAGGCTCAGGTAAAACGACCTTTTTAAACATCGCGGGCTTAC
TTGAAACCTTCGAAGAAGGCAGGTTTGAATTAGATGGAGTCGACATTAGCCATCAAAACGACGCGGCACGTAGCCGCTTA
CGTAACCAAAAAATTGGCTTTGTATTTCAGAGTTTTAATCTGATACCGGACCTTAACTTATTTGACAATGTTGATGTGCC
GCTTCGCTATCGTGGGTTTTCCCGCCAGGAGCGTAAAAAGCGTATTGAACACAACTTAGAAATGGTCGGTCTTGGAAATC
GAATGAAGCACTTACCAGCACAACTATCAGGGGGCCAGCAACAACGCGTTGCCATCGCTCGGGCGCTCGCTGGGGAACCG
CGTTTTCTGCTAGCCGACGAACCCACGGGTAACCTCGACAGCAGCATGGCCCAAAGCGTTATGGCTCTGCTCAAGGACAT
CAACGCCAATGGCACCACCATTATCATGGTAACCCATGACGCAGGTTTGGCCACACAAGCCAATCGGAATATTCATGTGA
GCGACGGTAAAGTAAGTGAGAAGGCTATGAGCTTAAGCCCTGAAGCGGCACAGTTTAAACCCTCGCAGCACAAGCGTGTT
GTCGGTTTAAGCGAGTAA

Protein sequence : 
MLTMKDIKKIYRTDSIETHALRDFNLHVNEGDFVAVTGPSGSGKTTFLNIAGLLETFEEGRFELDGVDISHQNDAARSRL
RNQKIGFVFQSFNLIPDLNLFDNVDVPLRYRGFSRQERKKRIEHNLEMVGLGNRMKHLPAQLSGGQQQRVAIARALAGEP
RFLLADEPTGNLDSSMAQSVMALLKDINANGTTIIMVTHDAGLATQANRNIHVSDGKVSEKAMSLSPEAAQFKPSQHKRV
VGLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Glaag_1962 YP_004434175.1 ABC transporter NC_012469.1.7686878. Protein 8e-50 47
Glaag_1962 YP_004434175.1 ABC transporter CP001581.1.gene798.p Protein 8e-39 45
Glaag_1962 YP_004434175.1 ABC transporter NC_008702.1.4606598. Protein 9e-42 44