Gene Information

Name : Glaag_2001 (Glaag_2001)
Accession : YP_004434214.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : Ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2333637 - 2334098 bp
Length : 462 bp
Strand : -
Note : KEGG: pat:Patl_2365 ribonuclease H; PFAM: ribonuclease H

DNA sequence :
ATGAAACACATAGAAATTTATACCGATGGTTCGTGTCTAGGCAACCCAGGTCCTGGTGGTTACGGGGCTGTTCTTTTGTT
TGGCAAGCATAAAAAAGAATTAAGCCAAGGCTTTACCCATACGACGAATAACCGTATGGAACTCTTAGCCACCATAGAAG
CACTGGCCAGTTTAACCGAAACCTGCAAAGTTGATTTAACCACCGACAGTCAGTACGTGAAAAATGGAATTAATCAATGG
ATCAAGAACTGGCGTAAAAATGGTTGGCGCACATCTGACAAAAAGCCAGTTAAAAATGTCGATTTATGGAAGCGTTTAGA
CGAGCAAGTCAATCAGCACCAAGTGCAATGGCACTGGGTTAAAGGGCATTCTGGACACCCCATGAATGAGCTTTGCGATG
TATTAGCCCGAAACGCAGCATCTAGCAAAGACTTATTACCGGACGATGGCTTTCAAGGCTAG

Protein sequence :
MKHIEIYTDGSCLGNPGPGGYGAVLLFGKHKKELSQGFTHTTNNRMELLATIEALASLTETCKVDLTTDSQYVKNGINQW
IKNWRKNGWRTSDKKPVKNVDLWKRLDEQVNQHQVQWHWVKGHSGHPMNELCDVLARNAASSKDLLPDDGFQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-39 65