Gene Information

Name : Glaag_3169 (Glaag_3169)
Accession : YP_004435371.1
Strain : Glaciecola sp. 4H-3-7+YE-5
Genome accession: NC_015497
Putative virulence/resistance : Unknown
Product : RNA methyltransferase, TrmH family, group 1
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 3696979 - 3697701 bp
Length : 723 bp
Strand : -
Note : KEGG: pat:Patl_1235 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU)

DNA sequence :
ATGCTAGAAAATATTAAAATCGTACTGGTTAACACATCCCATACGGGCAATATTGGTTCAACAGCGAGAGCCATGAAAAC
CATGGGCTTGAGTCAGTTAGTGCTGGTTGACCCAGTGTCTCCTCCTGATGGTAAGGCCAGTGCCTTAGCGGCTGGTGCGG
GTGACGTACTGGCTAATGCAAAAATAGTCTCTACCTTGGCAGAAGCAGTAGCGGACTGTGGTTTAGTGGTAGGTACTAGC
GCACGGTCACGTACGCTATCTTGGCCAATGTTAGAGCCCCGTGGTTGCGGCGAAAAATTAGTATCAGAAGTACCAAAATA
TCCTGTGGCGTTAGTTTTTGGGCGAGAGAATAACGGGCTAAGTAATGATGAATTGCAGCAATGCCACTTTCACGTGTGTA
TCCCTGCTAATCCCGAATACAGCTCTTTGAATTTGGCGGCTGCAGTACAGACACTTTGCTACGAAATTCGCATGGCTCAT
CTGAATGAAACTCGCCGAGAAAGCGTACAAGAAGAATACCCGCTGGCAGAAGATCTAGAAGGTTTTTATAGCCATTTGGA
ACAAACCCTATTCAAAACGAATTTTATCATTCCGAAACATCCAGGTATGGTCATGACCAAGTTACGCCGCTTGTTTAATC
GCGCTCGTCCTGAAACCCAAGAGCTGAACATACTGCGTGGCATTTTGGCATCCATCGAAAAGACCAGCAAAGAAAACAAA
TAA

Protein sequence :
MLENIKIVLVNTSHTGNIGSTARAMKTMGLSQLVLVDPVSPPDGKASALAAGAGDVLANAKIVSTLAEAVADCGLVVGTS
ARSRTLSWPMLEPRGCGEKLVSEVPKYPVALVFGRENNGLSNDELQQCHFHVCIPANPEYSSLNLAAAVQTLCYEIRMAH
LNETRRESVQEEYPLAEDLEGFYSHLEQTLFKTNFIIPKHPGMVMTKLRRLFNRARPETQELNILRGILASIEKTSKENK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 4e-64 53