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Name : Glaag_3174 (Glaag_3174) Accession : YP_004435376.1 Strain : Glaciecola sp. 4H-3-7+YE-5 Genome accession: NC_015497 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3701435 - 3703279 bp Length : 1845 bp Strand : - Note : KEGG: pat:Patl_1230 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : GTGTTAAACCAAACTCCGTTATGGAAGTATCTTGTACTGATTTTTATAGTCGGTATGTGTGCTCTATACGCTACGCCAAA TTTGTACGGTGAAGACTACGCCGTTCAAATCTCTGCCGGCCGTAATGCCAGTGTCGATGAGTCACTGTTAAACAAGGTCA CTGAAACTTTATCTAGCGAAAACATAGAAGCAAAAAATATCGCGTTAGATAATGAACAAATTTTAGTTCGCTTAACCAAT TCCGACAGTCAGCTAATCGCACGAGAAACCTTACAACGCGCTTTAGGTGACGATTACTATGTTGCTATGAACTTAGCCCC AGACACCCCAGCTTGGCTTGAAGCCATTGGTGGTGCGCCAATGAAACTCGGATTAGATTTACGCGGTGGTGTGCACTTTT TAATGGAAGTGGACATGAACTCAGCAGTGAACAAGTCATTTGAGGACATGGTCTCTGATTTCAGAAGTGCGCTGCGTGAA GAGGGCATTCGTTACCGTACTGTACGCCAAGTTGAAGGCGGGGTGGAAATATTCTTCCGCGATCAAGACACGTTAGATAA AGCAGAGTTTTTCTTACGCAACCGCAATCGTGACTTAGTGTTCACTGAGAAAAACGACCTTAAAATTGTTGTCAGTATGT CTGAGCAGAAACTGGCCGAGACGCGCGACTATGCGGTTAAACAGAACATTACTATTATTCGCAACCGTGTTAACCAGTTA GGTGTTGCTGAGCCAAGTGTTCAAAAGCAAGGGGTTGACCGTATTGCCGTGCAATTACCAGGTATCCAAGATACTGCACG AGCAAAAGAAATTCTAAACGCGACAGCAACGTTAGAGTTTCGCTCGGTAGATTTAGACCATGACGTGCGTGATGCTGTTG CAGGGCGCGTACCAGCGGGGTCTGAATTAGTGCTTGACCAACAAGGTCAGCCACAATTGCTTAAAAAGAAAATCATTTTA ACCGGTAATCACATCATCGATGCTAACTCTAGCGCTGATGAATACGGTATTCCTCAGGTTAATATCTCCCTTGATTCAAA GGGCGGCAGCAAGATGTCACAGTTTACCAAGGACAGTATTGGCAAGCCGATGGCAACCGTCTTTATCGAATACAAATCAA CCGGTGAGCGAGACGCTAACGACAAGCTGATTTTTGAAGCGAAGCGAGAAGTGATCAGTATCGCAACAATTCAGGCTCGT TTGGGTAGTAGCTTTCGTATAACTGGATTAGATTCGCCCCAAGAAGCGCACAACCTTTCACTCTTACTACGCGCAGGTGC ACTTATTGCACCCATTCAAATCGTGGAAGAACGCACCGTTGGGCCAAGCTTAGGTAAAGAGAATATTGCACTTGGTACCC AAGCCATTATTTGGGGCTTTGTCGCGGTACTTATCTTTATGCTGATTTATTATAAAGCATTTGGCGTAGTGGCAAACCTT GCCCTGACCCTCAACTTAGTGATGATAGTCGGTATTATGTCGATGATCCCTGGGGCCACGTTATCCCTTCCTGGTATGGC GGGTATCGTACTAACGGTCGGTATGGCGGTTGATGCGAACGTACTGATATTCGAGCGTATTCGTGAAGAGCTACGTGAAG GACGTAGTCCGCAACAGGCAATACATCATGGTTACGACAGTGCATTCTCAACCATACTTGATGCCAACATCACCACTTTC ATCGCAGGCCTGATTTTATTTGCCGTGGGCACAGGTCCGATTAAAGGCTTTTCGATCACGCTGATGATTGGTATCGCCAC TTCCATGTTTACCGCAATTTTTGTTACCCGTGCTGTTGTAAATGCATGGTGTGGTGGTAAGCCTTTGAAAAAACTATCTA TATAG Protein sequence : MLNQTPLWKYLVLIFIVGMCALYATPNLYGEDYAVQISAGRNASVDESLLNKVTETLSSENIEAKNIALDNEQILVRLTN SDSQLIARETLQRALGDDYYVAMNLAPDTPAWLEAIGGAPMKLGLDLRGGVHFLMEVDMNSAVNKSFEDMVSDFRSALRE EGIRYRTVRQVEGGVEIFFRDQDTLDKAEFFLRNRNRDLVFTEKNDLKIVVSMSEQKLAETRDYAVKQNITIIRNRVNQL GVAEPSVQKQGVDRIAVQLPGIQDTARAKEILNATATLEFRSVDLDHDVRDAVAGRVPAGSELVLDQQGQPQLLKKKIIL TGNHIIDANSSADEYGIPQVNISLDSKGGSKMSQFTKDSIGKPMATVFIEYKSTGERDANDKLIFEAKREVISIATIQAR LGSSFRITGLDSPQEAHNLSLLLRAGALIAPIQIVEERTVGPSLGKENIALGTQAIIWGFVAVLIFMLIYYKAFGVVANL ALTLNLVMIVGIMSMIPGATLSLPGMAGIVLTVGMAVDANVLIFERIREELREGRSPQQAIHHGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAIFVTRAVVNAWCGGKPLKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-115 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 46 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-115 | 46 |
