Gene Information

Name : Thena_0770 (Thena_0770)
Accession : YP_004437535.1
Strain : Thermodesulfobium narugense DSM 14796
Genome accession: NC_015499
Putative virulence/resistance : Unknown
Product : 1-deoxy-D-xylulose-5-phosphate synthase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3958
EC number : 2.2.1.7
Position : 752466 - 753386 bp
Length : 921 bp
Strand : +
Note : COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: ttm:Tthe_1907 transketolase central region; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase;

DNA sequence : 
ATGAAGGCGACCAGGGAAGCTTATGGAGAAGCACTATTGGAGTTGGGAAGGTCAAACGATAAAGTAGTAGCTTTGGATGC
AGATCTTTCTAAATCTACTAAAACTTCGCTCTTTGCAAAGGAATTTCCTGAGAGATTTTTCAATGTTGGGATAGCTGAAC
AAAATTTGATAGGAGTAGCTGCCGGGCTTTCTCTTGCGGGATTCGTTCCTTATGCTAGTACCTTTGCAATATTTGCTACT
GGGAGAGCGTGGGAGCAGATTAGAAATACTGTGGCTTATCCATCTTTAAACGTTAAAATATGTGCATCTCATGCAGGAAT
TACTGTAGGAGAGGATGGGGCATCACATCAATCTATAGAAGACATAGCTTTGATGTCAGTAATTCCTAATATGACAGTGT
TAGTTCCTGCAGATCCTATAGAAACAAAATCAATGGTAAATTGGGCATATCAGCATAATGGTCCTGTGTATATAAGATTG
GGAAGAATGGGAGTTCCAAATATTTTACCTAATGATTATAAATTTGATACAAAACCTTTTATTCTAAAAAAAGGAAAAAA
AATAGTGATATTTGCTACTGGAATAATGTTGTGGAAATGTCTTGAAGCAATTGAGCTATTGAAACCTTATAACTTAGAGC
CAACTTTAGTAAATGTTTCTTGTATAAAGCCCCTTCCTGAAGAGTCTATAATAGAAATTGCAAAAGAGCACGAAATAGTA
TTAACTGCTGAAGAACATAATATTATAAACGGGCTTGGATCAATGATTTCATCAACTCTTTCGAGAAATTATCCAATGAA
AGTATCTTTTATTGGTATCAATGATAAATTTGGAACATCAGGAAAACCAAATGATTTATTAAGTTATTATGGCTTGGATG
CAAACAGTATAAAAGAGAAATTGTTATTATTAGGGTCGTAA

Protein sequence : 
MKATREAYGEALLELGRSNDKVVALDADLSKSTKTSLFAKEFPERFFNVGIAEQNLIGVAAGLSLAGFVPYASTFAIFAT
GRAWEQIRNTVAYPSLNVKICASHAGITVGEDGASHQSIEDIALMSVIPNMTVLVPADPIETKSMVNWAYQHNGPVYIRL
GRMGVPNILPNDYKFDTKPFILKKGKKIVIFATGIMLWKCLEAIELLKPYNLEPTLVNVSCIKPLPEESIIEIAKEHEIV
LTAEEHNIINGLGSMISSTLSRNYPMKVSFIGINDKFGTSGKPNDLLSYYGLDANSIKEKLLLLGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 5e-39 41
unnamed AAT96230.1 transketolase Not tested T-PAI Protein 8e-33 41