Gene Information

Name : Trebr_R0047 (Trebr_R0047)
Accession : -
Strain : Treponema brennaborense DSM 12168
Genome accession: NC_015500
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2046758 - 2048288 bp
Length : 1531 bp
Strand : -
Note : IMG reference gene:2504920646

DNA sequence : 
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCGCGTCTTAAGCATGCAAGTCGAACGGCAAGAGATAGCAATATCT
CCTAGAGTGGCGGACTGGTGAGTAACACGTGGGTGACATACCCTTCAGATGGGGATAGCTATTAGAAATAGTAGATAATA
CCGAATACGAGCACAGAGGTTAGAGAGCTGTGAGGAAAGGAGCTAAGGCTCCGCTGAAGGAATGGCCTGCGGCCCATTAG
CTAGTTGGTGAGGTAAAAGCCCACCAAGGCGATGATGGGTATCCGGCCTTAGAGGGTGAACGGACACATTGGGACTGAGA
TACGGCCCAGACTCCTACGGGAGGCAGCAGCTAAGAATATTCCGCAATGGACGAAAGTCTGACGGAGCGACGCCGCGTGG
ATGAAGAAGGCCGGAAGGTTGTAAAATCCTTTTGAAACTGAAGAATAAGCGTTGTAGGGAATGACAGCGTGGTGACAGTA
GGTTTTGAATAAGCAACGGCTAATTACGTGCCAGCAGCCGCGGTAACACGTAAGTTGCGAGCGTTGTTCGGAATTATTGG
GCGTAAAGGGCATGTAGGCAGTTTTGCAAGCTTGGTGTGAAATCCCGGGGCTCAACCCCGGAACCGCATTGAGAACTATA
AGACTAGAGTTACTGAAGTGAAACTGGAATTCCAGGTGTAGGGGTGAAATCTGTAGATATCTGGAAGAACACCAATGGCG
AAGGCAAGTTTCAGGCAGATAACTGACGCTGAGGTGCGAAGGTGCGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCG
CACAGTAAACGATGTACACTAGGTGTCTGGTCAAGAGACTGGGTGCCAAAGCAAACGTGATAAGTGTACCGCCTGGGAAG
TATGCCCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGGTAC
GCGAGGAACCTTACCTGGGTTTGACATATACTGGAATGTGTTGGAGACAACAGAGCGTAGCAATACGCCGGTATACAGGT
GCTGCATGGCTGTCGTCAGCTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTACTGCCAGTTACC
AGCAAGTAATGTTGGGGACTCTGGCGGAACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGC
CCTTATGTCCAGGGCTACACACGTGCTACAATGGTTGAAACAGAGCGAAGCGAATCCGCAAGGTAGAGCAAAACGCAAAA
AAGCAATCGTAGTTCGGATTGGAGTCTGAAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGCATCAGCACGGCG
CGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATCCGAGTAGAGGGTACCCGAAGCCGGTAGTCTAAC
CCGAAAGGGAGGACGCTGTCGAAGGTACGTTTTGTAAGGAGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGG
CTGGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-104 82.7
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-104 82.7
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-101 82
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-101 82
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-101 82
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-101 82