Gene Information

Name : Poras_0834 (Poras_0834)
Accession : YP_004441946.1
Strain : Porphyromonas asaccharolytica DSM 20707
Genome accession: NC_015501
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1038546 - 1041140 bp
Length : 2595 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR017730:IPR004176:IPR003959:IPR 013093:IPR019489; KEGG: pgi:PG1118 ClpB protein; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase

DNA sequence :
ATGAACATAGATAAGTACACCATTAAATCGCAGCGGGTGATCCAAACGATGATCGCCCAAGCGCGTCAGCAGGAGCATCA
GGCTCTAGAGCCGATATGCCTCCTAGATGCGCTGCTACGTGAGGGTCGTGACGTCGTCGAGTATGTCGCTACCAAGGCGG
GGGCCTACATGCATCAGATAGAGCAGTCGGTAGCGCAGCAGCTAGAGCGTCTGCCTCACGTATCTGGTGGAGAGCCTTAC
CTCTCTAACCAGACAAACCAAGTGCTCACCCAGTCGGAGCAGATAGCTAGCGAGATGGGTGACCAATACATAGCTGTGGA
GCACATCTTCCTAGCACTCCTCAAGGTACCTAGTGATGCGCGTCAGCTACTTCTCGACGCAGGTCTGACCTACGCTGACG
CTGAGGCTGCTATCCGTGAGCTTCGCAAGGGGCGCAAGGTAGACTCCGCAACAAGTGATCAGCAGTACAACGCACTCGGC
AAGTACGCTATCAACCTCTGCGAGCGAGCTCGTGAGGGCAAGCTGGATCCTGTCATAGGTCGCGACGAAGAGATACGTCG
TGTCCTGCAGATACTCTCCCGCCGTACGAAGAATAATCCTATCCTCGTCGGTGAGCCAGGTGTCGGTAAGACCGCTATCG
CCGAAGGCTTGGCGCACCGCGTCATACGTGGTGACGTGCCAGAGAACCTCAAGGACAAGCTCATCTACTCACTCGATATG
GGAGCTCTCATAGCAGGAGCAAAGTATCAAGGAGAGTTTGAGGAGCGTCTCAAGTCAGTCGTCAACGAGGTGACCGCCTC
CAATGGTGAGGTGATCCTATTCATCGATGAGATCCATACGCTCGTCGGTGCGGGAGCTTCGCAAGGTGCTATGGATGCGG
CAAACATCCTTAAGCCTGCCCTCGCTCGTGGTGAGCTACGGGCTATCGGTGCCACCACCCTCGATGAGTACCGTAAGTAC
TTTGAGAAGGACAAAGCGCTCGAGCGTCGCTTCCAGATGGTGATGGTCGATGAGCCTGACGAGATGAGCAGTATCTCTAT
CCTCAGAGGACTGAAGGAGCGGTACGAGAACCACCACAAGGTGCGTATCCAAGATGACGCCATACTGGCTGCCGTACAGC
TGAGCGAGCGATACATCACCGACCGCTTCCTCCCCGACAAGGCGATAGACCTTGTGGACGAGGCTGCCGCACGACTACGC
ATCCAGATAGACTCGATGCCCGAAGAGCTAGACGAGCTGGAGCGTCGTATCAAGCAGCTAGAGATAGAGCGCGAGGCGAT
CAAGCGTGAGCACGATGAGCCTAAGCTGGCGGCACTCTCCAAGCAGATAGCCGATCTAGAGGAAGAGCGCAATGCTCTGG
CCGCTCAGTGGCATGGCGAGAAAGACTTGGTCAATGAGGCGCAGCAGCTGAAGGTGGAGCGTGAACAGACATCTATCGAA
GCGGACAAAGCTGAGCGCATGGGCGACTACGGTCGTGTGGCTGAGCTACGCTACGGACGACTCAAGGAGATCGATGATCA
GATAGCTCAGATCAATAAGAAGCTTGCCGAGCAGCGTGCCTCTGGCACCGCACTGATCACCGAGGAGGTGACAGCCGAAG
ATATCGCTGACATCGTAGCTCGCTGGACCGGTATCCCCGTGAGCCGTATGCTTATGAGCGAGCGGGACAAGCTACTCAAC
CTAGAGGAGGAGCTACACAAGCGTGTCGTCGGTCAGGAGGAGGCGATCACCGCCATTGCAGATGCAGTGCGTCGTAGTCG
TGCAGGCTTGCAAGATCCCAATAGACCGATCGGCTCCTTTATCTTCCTCGGCACGACAGGTGTCGGTAAGACTGAGGTAG
CTAGAGCCTTGGCGGAGTGCCTCTTTGACGATGAGCACATGATGACCCGTATCGATATGAGCGAGTATCAGGAGAAGTTT
AGTGCGACTCGTCTCATCGGAGCGCCTCCTGGCTACGTCGGTTACGATGAGGGCGGTCAGCTCACTGAGGCTATCAGGCG
TAAGCCCTACTCGGTTGTGCTCTTTGATGAGATTGAGAAGGCGCATCCCGATGTCTTCAACCTACTCCTCCAGGTACTGG
ACGATGGTAGATTAACGGACAATAAGGGGCACGTGGTCAACTTCAAGAACACGATCATCATCATGACTAGCAACCTAGGC
TCCGACCTGATCCGTCACAACTTCGAGCACATCGACGAGCAGAACCGTGAAGAGGTCATCGAGCGTACCGAGGAGGAGGT
CAAGACGCTACTCAAGCAGACGATCCGTCCTGAGTTTGTCAACCGTATCGACGAGACCATCGTCTTCACACCGCTGACGA
AGGCTCAGATCGCTCAGATCGTACGTCTACAGCTCGACAAGGTGGCTCGCACACTCCAGGAGAACGGCGTGACGCTCCAC
TACAGCGATGCTGCCATCGACCTACTAGCCGAGCGAGGCTACGACCCCGAGTTTGGTGCACGTCCTGTCAAGCGCGTCAT
ACAGCGACTCGTCCTCAACGAGCTCTCGAAGGCACTTCTAGCTGGCACCGTAGAGCGCACGAAGCCTATCACGCTAGATG
TAGGAGCTGACGGACAGCTCACCTTCCTAGACTAA

Protein sequence :
MNIDKYTIKSQRVIQTMIAQARQQEHQALEPICLLDALLREGRDVVEYVATKAGAYMHQIEQSVAQQLERLPHVSGGEPY
LSNQTNQVLTQSEQIASEMGDQYIAVEHIFLALLKVPSDARQLLLDAGLTYADAEAAIRELRKGRKVDSATSDQQYNALG
KYAINLCERAREGKLDPVIGRDEEIRRVLQILSRRTKNNPILVGEPGVGKTAIAEGLAHRVIRGDVPENLKDKLIYSLDM
GALIAGAKYQGEFEERLKSVVNEVTASNGEVILFIDEIHTLVGAGASQGAMDAANILKPALARGELRAIGATTLDEYRKY
FEKDKALERRFQMVMVDEPDEMSSISILRGLKERYENHHKVRIQDDAILAAVQLSERYITDRFLPDKAIDLVDEAAARLR
IQIDSMPEELDELERRIKQLEIEREAIKREHDEPKLAALSKQIADLEEERNALAAQWHGEKDLVNEAQQLKVEREQTSIE
ADKAERMGDYGRVAELRYGRLKEIDDQIAQINKKLAEQRASGTALITEEVTAEDIADIVARWTGIPVSRMLMSERDKLLN
LEEELHKRVVGQEEAITAIADAVRRSRAGLQDPNRPIGSFIFLGTTGVGKTEVARALAECLFDDEHMMTRIDMSEYQEKF
SATRLIGAPPGYVGYDEGGQLTEAIRRKPYSVVLFDEIEKAHPDVFNLLLQVLDDGRLTDNKGHVVNFKNTIIIMTSNLG
SDLIRHNFEHIDEQNREEVIERTEEEVKTLLKQTIRPEFVNRIDETIVFTPLTKAQIAQIVRLQLDKVARTLQENGVTLH
YSDAAIDLLAERGYDPEFGARPVKRVIQRLVLNELSKALLAGTVERTKPITLDVGADGQLTFLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-117 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Poras_0834 YP_004441946.1 ATP-dependent chaperone ClpB VFG2076 Protein 6e-129 44
Poras_0834 YP_004441946.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-113 42