Gene Information

Name : Halhy_2553 (Halhy_2553)
Accession : YP_004447299.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Virulence
Product : xenobiotic-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : -
Position : 3266984 - 3269149 bp
Length : 2166 bp
Strand : -
Note : COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR005074:IPR001140:IPR003439:IPR003593; KEGG: zpr:ZPR_4399 probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein; PFAM

DNA sequence :
ATGGGTGTAAAAATCAAACAGCATGACATCACCGATTGTGGAGCGGCTTGTATTGCTTCTATTTGTGCGCATTACAAGTT
GAAATTGCCCATCGCCCGTATACGCCAAAAAGCGGGTACGGATCAAAAAGGGACCAATCTATTGGGCATGATTGCGGCGG
TAGAACAGTTGGGCTTCTCGGCCAAAGGGGTAAAAGCCCAAATGGCAGCCCTATCCAAAATCCCCTTGCCTGCGATTGCC
CATGTGATTGTGAACAAACAATTGCACCATTATGTCGTGCTGTATAAGGTAGAAAAATCCTCGGTTCTGGTAATGGATCC
CGGGATGGGCAGGTTAGAAAAGTGGCCAACCGAAAAATTCCAGGAAATGTGGACAGGGGTTTTGCTGCTGTTGGCACCCA
ACGATACCTTTGAAACCGGCACCCAAAAAATCTCGGTAGGAAAGCGCTTCTGGCATCTCCTCCAACCCCACCGTTTTATC
CTGGTACAGGCCCTTTTGGGTGCTATTGTTTACACTTTGTTGGGTTTGGCTTCGCCGATTTACATTCAGAAAATCACTGA
TCAGGTGCTGGGTACCGGCAATACCAGCCTTTTGAATTTGTTGAGTGTGGTGATGCTGTGCCTGGTTTTTGTACAACTGA
CCATCAATTGGTTGAAGTCGATTTTTGTATTAAAAACCGGCCAGATGATTGATGCTGCGCTAATTCTGGGGTATTACAAA
CACCTGCTCAGTTTGCCCCAGCGTTTTTTTGATACCATGCGGATTGGTGAAATTCTCTCCAGGATTGGTGATGCCGTGAA
AATTCGCACTTTTATCAATGATGTCGCGATCAACATTGTCGTAAACGTCCTGATTTTGGTTTTCTCCCTGCTCTTGATGT
TTACGTACTATTGGAAGTTTGCCGCCTTGATGCTGTTAACCTTGCCCTTGTACCTGCTCATTTATTGGATTTCCAATCGA
TTAAACAAGGTGTGGGAGCGCAAATTAATGGAAGACTCCGCTGGTTTGGAAACCCAACTGGTGGAGTCCCTGAACAATAT
CCGCACCATCAAGCAATTTGGACTGGAGGGATTTACGAATGTCAAAACCGAGCAAAAATTTGTATCCTTACTCAATACCA
TTTTTCAATCTGGTAAAAACCAATTGGTATTGGGCAATGCTTCCGAGCTGGTCAGTCGGCTGTTTACCATTGTGTTGCTG
TGGGCGGGTACTTATTTCGTTTTGGATCGGCACATCACTCCTGGCGAACTATTGTCCTTTTATGCCCTGATTGGCTATTT
CAATGGGCCAGTCAGTAGCCTGATTGGCATGAACCGCACCATTCAAAATGCCTGGATCGCTGCCGACCGTTTGTTTGAGA
TCATTGATCTGGAGACCGAATCTTCCGTGCACGCCGTTGACTTGAATTCCGAACAAGTGGGAGACATTGTGCTCGACAAC
GTAGATTTTAATTACGGTACCCGAAAAATGGTCTTTAAAAACCTGAGTCTCACCTTCAAAAAAGGTGCATCCACGGGCAT
CGTGGGTGAAAGTGGCTGTGGTAAATCGACGATCGTGTCGATGCTACAAAAACTGTACCCCATCAATGGCGGCAAAATCC
GCTTTGGCCACATTGATTTGCACTATGTTTCCAATCGTTCCTTGCGCAAAATTGTAGCTGTGGTGCCCCAACAGATCGAC
ATTTTTGCAGGTACTGTGCTGGAAAATATCGCGATAGGTGACCCATATCCTAATTTTGAGCGGGTCATCGACCTTTGTCA
TCAATTGGGTATTCTGCCCTTTATTGAGTCGCTTCCGGGAGGTTTTGGGGCTTTGTTGGGCGAAAACGGGGCGAATTTGT
CTGGCGGTCAAAAACAACGCTTGGGCATCGCCCGGGCACTGTATCGTGACCCCGAGGTCCTGATCATGGACGAAGCAACT
TCTTCGCTGGATTCAAGCTCGGAAGCTTTTGTGCAAAACACGATCCACGCTTTACAACAACAGGGTAAAACCATCATCAT
TATTGCCCACCGCTTAAGCACCGTCATGGATACCGACAAAATCATCGTACTACACGATGGCAAACTCATGGAGGAAGGAA
ACCACCAGGAATTACTTGAGCAAAGAGGAGCGTATTTTTCTTTGTGGGCCAAACAATTCCCCATGCTGCTCCAAACCAGC
AGGTAA

Protein sequence :
MGVKIKQHDITDCGAACIASICAHYKLKLPIARIRQKAGTDQKGTNLLGMIAAVEQLGFSAKGVKAQMAALSKIPLPAIA
HVIVNKQLHHYVVLYKVEKSSVLVMDPGMGRLEKWPTEKFQEMWTGVLLLLAPNDTFETGTQKISVGKRFWHLLQPHRFI
LVQALLGAIVYTLLGLASPIYIQKITDQVLGTGNTSLLNLLSVVMLCLVFVQLTINWLKSIFVLKTGQMIDAALILGYYK
HLLSLPQRFFDTMRIGEILSRIGDAVKIRTFINDVAINIVVNVLILVFSLLLMFTYYWKFAALMLLTLPLYLLIYWISNR
LNKVWERKLMEDSAGLETQLVESLNNIRTIKQFGLEGFTNVKTEQKFVSLLNTIFQSGKNQLVLGNASELVSRLFTIVLL
WAGTYFVLDRHITPGELLSFYALIGYFNGPVSSLIGMNRTIQNAWIAADRLFEIIDLETESSVHAVDLNSEQVGDIVLDN
VDFNYGTRKMVFKNLSLTFKKGASTGIVGESGCGKSTIVSMLQKLYPINGGKIRFGHIDLHYVSNRSLRKIVAVVPQQID
IFAGTVLENIAIGDPYPNFERVIDLCHQLGILPFIESLPGGFGALLGENGANLSGGQKQRLGIARALYRDPEVLIMDEAT
SSLDSSSEAFVQNTIHALQQQGKTIIIIAHRLSTVMDTDKIIVLHDGKLMEEGNHQELLEQRGAYFSLWAKQFPMLLQTS
R

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CPR_1082 YP_698404.1 bacteriocin ABC transporter ATP-binding/permease Virulence Not named Protein 6e-125 41