Gene Information

Name : Halhy_6068 (Halhy_6068)
Accession : YP_004450763.1
Strain : Haliscomenobacter hydrossis DSM 1100
Genome accession: NC_015510
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 7753684 - 7753926 bp
Length : 243 bp
Strand : -
Note : COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: chu:CHU_2346 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Conserved domain protein; IMG reference gene:25047754

DNA sequence :
ATGGAGTATCTTTGTATCGGCAAATCGCCATATCACCATTTACTTTTTGAAATGCATACTGGTACCGTTAAATTTTTCAA
CGAATCCAAAGGATTTGGGTTCATCGTAGACAACTCCTCAAACGAGGAATTTTTCGTACACGTTACGGGTTTGGTTGACA
AAATCCGCGAGGGTGACTCAGTCACTTTCAACGTCGAAAATGGCAGAAAAGGAATGAACGCAGTAGAGGTTAAACTTGCT
TAA

Protein sequence :
MEYLCIGKSPYHHLLFEMHTGTVKFFNESKGFGFIVDNSSNEEFFVHVTGLVDKIREGDSVTFNVENGRKGMNAVEVKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 4e-07 44