Gene Information

Name : ambt_13910 (ambt_13910)
Accession : YP_004468102.1
Strain : Alteromonas sp. SN2
Genome accession: NC_015554
Putative virulence/resistance : Unknown
Product : Cytochrome c biogenesis factor
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1138
EC number : -
Position : 3138556 - 3140601 bp
Length : 2046 bp
Strand : -
Note : COG1138 Cytochrome c biogenesis factor

DNA sequence :
ATGGTGCCTGAGATTGGGAACATTGCGTTAACACTCGCCTTAGTATTATCTATATTGCTTGCAGTTTACCCGCTTTGGGG
GGCTCATCGTCAACACGACACGCTAATGGCTACCGCAAAGCCCTTGGCGATTGGATTGTTTGTTTTTACCCTAATCGCGT
ATTTGTGCTTAACCTATGCCTTTGTTACCGATGATTTCAGTGTTGAGTATGTGGCGCAGCATTCCAACAGCCAGCTTCCA
CTTGTCTATAAAATTACTGCAGTTTGGGGCGGGCATGAAGGTTCGTTTTTGCTGTGGGTTTTAATGCTGTCAATTTGGAC
GGTAGCAGTCGCCATATTTAGCCGAGGTATTCCTCTTACCATGGTTGCAAGGGTGCTATCGGTGCTAGGTATGGTTGGTA
TTGGCTTTTATTTGTTTATGCTGCTTACCTCAAATCCCTTCAATAGCATGTTGCCGTTTTTCCCTGTCGATGGCCGAGAT
TTAAACCCGCTTCTGCAAGATTTTGGCATGATCATTCACCCGCCAATGTTATACATGGGGTATGTAGGCTTCTCAGTGGC
GTTCGCTTTTGCTATTTCTGCATTGATTTCAGGTCAACTCGATTCCACATGGGCGCGTTGGGCTCGTCCGTGGGTCATTG
CTGCCTGGGCGTTTCTTACTGTAGGTATCGCTCTTGGTAGCTGGTGGGCTTACTACGAACTTGGCTGGGGTGGCTGGTGG
TTCTGGGATCCCGTAGAAAACGCATCCTTTATGCCTTGGTTGGTGGGAACCGCCTTGATGCACTCTTTGGCGGTAACGGA
AAAACGAAAAGCCTTTAAGTCGTGGACGGTATTACTCGCTATTGCTGCGTTTTCGTTGAGTTTGTTGGGAACCTTCTTAG
TTCGCTCAGGAGTGATTGTTTCCGTTCACTCTTTTGCAAGCGACCCAACACGTGGGCTATTCATACTCGGTATTCTTATC
GTGTTGAGTGGCTTTGGCTTGTTGCTATATGCCATGCGCGCTTCAGCTTTAAAGAGCCCCGGTCGATACCAAGCGTTTTC
TCGTGAAGTATTGCTCATGGGTAATAACGTATTTTTGTGTGCCGCTACGTTAGTGGTGTTACTTGGTACCTTATTGCCAC
TTGTTCATAAAGAACTAGGGCTAGGCAGTATTTCAGTGGGGGCGCCATTTTTTAATCAAATGTTTACCCTGTTGATTGTG
CCGTTTGTGTTGTTCTTAGGCCTTGGGCCTTTAACTCGCTGGAAACACCAGACTGCAGGTGCACTCAAAAATCAGTTGCT
TGTCGCTGGTGGAATTGCAATAAGTGCAGCGCTTTTGGTCAATTTTAGTTACGACACTCCACAGTATATGGGTGTACTGG
GCATGATACTCGTGTTTTGGATTTTGATTACTACCGTGCAAGAAGTGCTTCAGCGCGTTAATGCTAACCCAAGTAATACC
AGTACATTTACAAAGCTACGCAAGCTTACGCCAAGTCATTGGGGCATGGTATTAGGCCATATCGGGTTTGCCATCAGTAT
TATCGGCATTACTTTAGTGTCTAACTATGAGTTAGAGCGGGATGTAAGAATGGAAGTGGGCGAAACAGTAGAGCTTGGCG
GTTATGCTTTTACTTTTACCGATATTAAGCCTTTCCAAGGCCCTAATTACACCGCTGATGTGGGTGTATTTGATGTGAAC
AGGGCGGATGAATTTGTTGTACATTTAGAACCAGAAAAGCGTATGTATACAGTTCAGCGTATGCCAATGACAGAAGCGGC
AATTCATTCTACGGTATCGCGGGATTTATTTATTGCCATGGGCGAGCCCCTTGATGATGGAGCCTGGGCAGTTCGTATTT
ACATAAAACCGTTTGTAGCATGGTTATGGGCAGGCGCGGTTGTCATGGCGATTGGCGGTATATTCTCGATCAGCGATAAA
CGCTATCGCATGACCAAAGTGAAAAAAGTGGCGAAAGCTATTAACCGCATGACAGGAAAGGCACACCCCCTTGAAGCGGA
TAAGAAAAATACAAGTGATGCCGGCAGTCAGGAGGTCACACAATGA

Protein sequence :
MVPEIGNIALTLALVLSILLAVYPLWGAHRQHDTLMATAKPLAIGLFVFTLIAYLCLTYAFVTDDFSVEYVAQHSNSQLP
LVYKITAVWGGHEGSFLLWVLMLSIWTVAVAIFSRGIPLTMVARVLSVLGMVGIGFYLFMLLTSNPFNSMLPFFPVDGRD
LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFAISALISGQLDSTWARWARPWVIAAWAFLTVGIALGSWWAYYELGWGGWW
FWDPVENASFMPWLVGTALMHSLAVTEKRKAFKSWTVLLAIAAFSLSLLGTFLVRSGVIVSVHSFASDPTRGLFILGILI
VLSGFGLLLYAMRASALKSPGRYQAFSREVLLMGNNVFLCAATLVVLLGTLLPLVHKELGLGSISVGAPFFNQMFTLLIV
PFVLFLGLGPLTRWKHQTAGALKNQLLVAGGIAISAALLVNFSYDTPQYMGVLGMILVFWILITTVQEVLQRVNANPSNT
STFTKLRKLTPSHWGMVLGHIGFAISIIGITLVSNYELERDVRMEVGETVELGGYAFTFTDIKPFQGPNYTADVGVFDVN
RADEFVVHLEPEKRMYTVQRMPMTEAAIHSTVSRDLFIAMGEPLDDGAWAVRIYIKPFVAWLWAGAVVMAIGGIFSISDK
RYRMTKVKKVAKAINRMTGKAHPLEADKKNTSDAGSQEVTQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 2e-148 56
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 3e-145 54