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Name : secD (ambt_03810) Accession : YP_004466114.1 Strain : Alteromonas sp. SN2 Genome accession: NC_015554 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 878308 - 880155 bp Length : 1848 bp Strand : + Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGCTAAATAAAAATTCAATCTGGAAAGTGCTAAGTACGCTTATCGTCATTGGACTATGCGCACTTTATGCACTTCCCAA TATCTACGGTGAAGATCACGCAGTGCAGATTTCTGCAGGCCGTGACGCTGTCGTAACCGAGTCAATGATAGGCCAAGTTG AGTCTACGTTGGCGGCAAAAGGTATTACTCCCAAGCGCATCGAATTCGAAGATGAGCAAATTCTCGTTCGTATCTCAGAT TCAGACACTCAATTAGTTGCCCGTGAAGCATTAGAAGATGCATTAGGTGACGATTACTTTGTGGCAATGAACCTTGCACC TGATACGCCGGAATGGCTTGAAGGGTTAGGTGGCACGCCAATGAAACTTGGTTTGGACTTACGCGGCGGCGTTCATTTCT TAATGGAAGTGGATATGACCGAAGTCATCACTAAGTCATTAGAAGATGCTGAAAGTGGATTTCGTACCTCTTTGCGCGAA GAAGGCATTCGCTATCGTGGTGTTACACAGAAAGAAGACTACGTAGAAATTACGTTCCGTGATGAAGAAACGCTTGATAA AGCAGAGTTTTTCTTACGTAACCAAAATCGCGACCTTACGCTAAACCAAACTGACGACCTAGTACTTCGAGCGGTTTTCT CTGAAGCTAAACTTCAAGAGATTCGCGAGAACGCGGTTAAGCAAAACATTACCATTATTCGTAACCGTGTTAACCAATTA GGTGTTGCTGAGCCTTTGGTTCAAAAACAAGGTGCTGACCGTATTGTTGTGCAACTTCCTGGTATTCAAGATACGGCCCG TGCTAAAGAAATTCTAAATGCTACCGCAACCTTAGAATTTAGAATGGTTGATCAGAAAAACGACGTGCGTGACGCTATTA GCGGTCGTGTACCAGCGGGTTCTCAAGTTATTGAAGACCAGCAAGGTATTCCGCAGTTGCTTGAAAAACGCATTATGCTT ACCGGAAGTCATATCATTGATGCCAATAGTGGTGTAGATGAATACGGTTTGCCTAACGTTAATATTTCTCTTGATTCAGA GGGCGGCAATAAAATGTCTCGCTCGACCCGTGGCAACATTGGCAAACCAATGGCGACGGTATTTATTGAATACAAGTCGA ACGGCGAGCGTAATAAAGACGACAAGCTAATCTTCGAAAAGCACGAACAGGTTATTTCTGTAGCCACTATTCGTGCACAG TTAGGCAGTAAGTTTCAAATTACGGGTCTAGATTCACCAAAAGAAGCGCGTGATTTAGCCTTGTTACTCCGTGCCGGAGC ATTGATTGCGCCTATCCAAATTGTTGAAGAGCGCACAGTAGGGCCAAGTTTAGGTAAAGAGAACATTGAGCTTGGTACAC AAGCTATTGTGTATGGTTTGTTGGCGGTACTTGTGTTTATGCTCATTTACTACAAAGCCTTTGGTATTGTGGCAAACATT GCACTTATCACCAACTTGGTGATGATTGTGGGTATTATGTCTATGATCCCTGGTGCGACGCTAACCTTACCGGGTATGGC GGGTATCGTACTTACCGTAGGTATGGCAGTAGATGCCAACGTGCTGATATTCGAGCGTATTCGCGAAGAGATACGTGATG GAAGAAGCCCTCAACAGGCCATTCATCATGGCTATGACAGCGCGTTCTCTACCATTTTAGATGCTAACATCACAACGTTC ATTGCGGGTCTTATTCTGTTCGCTGTAGGAACCGGTCCAATTAAAGGCTTCTCTATTACGCTAATGATTGGTATTGCTAC CTCTATGTTTACTGCCATTTTACTAACACGCGTTATTGTTAACGCTGTGTGGGGCGGTCGACGTAATGTACAGAAATTAG CGATATAG Protein sequence : MLNKNSIWKVLSTLIVIGLCALYALPNIYGEDHAVQISAGRDAVVTESMIGQVESTLAAKGITPKRIEFEDEQILVRISD SDTQLVAREALEDALGDDYFVAMNLAPDTPEWLEGLGGTPMKLGLDLRGGVHFLMEVDMTEVITKSLEDAESGFRTSLRE EGIRYRGVTQKEDYVEITFRDEETLDKAEFFLRNQNRDLTLNQTDDLVLRAVFSEAKLQEIRENAVKQNITIIRNRVNQL GVAEPLVQKQGADRIVVQLPGIQDTARAKEILNATATLEFRMVDQKNDVRDAISGRVPAGSQVIEDQQGIPQLLEKRIML TGSHIIDANSGVDEYGLPNVNISLDSEGGNKMSRSTRGNIGKPMATVFIEYKSNGERNKDDKLIFEKHEQVISVATIRAQ LGSKFQITGLDSPKEARDLALLLRAGALIAPIQIVEERTVGPSLGKENIELGTQAIVYGLLAVLVFMLIYYKAFGIVANI ALITNLVMIVGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIFERIREEIRDGRSPQQAIHHGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAILLTRVIVNAVWGGRRNVQKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 8e-123 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-122 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-122 | 47 |
