Gene Information

Name : Psefu_1489 (Psefu_1489)
Accession : YP_004473559.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 1605521 - 1607806 bp
Length : 2286 bp
Strand : +
Note : KEGG: avn:Avin_37010 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug

DNA sequence :
ATGAATCCGAACTACAAACCGAGTCTGCTGGCTACGGCCGTTATGGTGGCGTTCAGTGCGCCGACTGCAGTAACTGCGCA
AACCACGGAAATCACCCTCGATGAAGCGGCGGCCAGCGAAGGCGTGCAGGCGCAGCAGGGCAGCCAGGGTTTGGAAATCG
GCGAAACGCGGATCATCGGTACCGCCGAGCAGGAACTCAAGCAGGCCTCCGGGGTTTCCATCATCACGGCTGACGATATC
CAGCGTCACCCGCCGGCCAACGACCTGTCCGAAATCATCCGCCGCATGCCGGGCGTCAATCTCACCGGCAACAGCGCCAG
CGGGCAGTTCGGCAATAGCCGGCAGATCGACTTGCGTGGCATGGGCCCGGAAAACACCCTGATTCTCATCGACGGCCGGC
CCGTTGCTTCACGCAATGCCGTGCGCATGGGGCGCTCCGGTGAGCGCAACGGCCGCGGCGACAGCAACTGGGTGCCGGCC
GAGGCGATAGAGCGCATCGAGGTGCTGCGCGGTCCTGCCGCTGCCCGCTATGGCTCCGGTGCCGCAGGCGGGGTGGTGAA
CATCATCACCAAGGCGCCCGGCAAGACGGTGTCCGGGTCGATTACGGCCTACACCAATATCCCGGAGAACAGTGATGAAG
GCGCGACCCGGCGCCTGAGCTTCAACACCGCAGGGCCGCTGACCGACAATCTGTCATTTCGCGTGTACGGCAACCTGAAC
AAGACCGAAGCCGACGATGCCGCGCTCAACGATGACTACGCCGTGGGTAGCAACCCCGCGCCAGCCGGGCGCGAAGGGGT
GCGCAACAAGGACATCAACACGCTGTTGCGCTGGGACGTAACTCAGGAGCAGACCCTCGAATTCGAAACCGGCTTCAGTC
GCCAGGGCAACATCTACGCCGGCGAGCGCGCCCAGGATCACGCCTCCACGATCGGCAATACCAACGGCCTGTTAGGTCGC
GAAACCAACACCATGTACCGCCAGACCGCGGCGATTACCCATCGCGGCGACTGGGACATCGGTACCTCCCAGATCGGCAT
CTCCTACGAGAACACCCGCAATCGGCGGATGGCCGAAGCGCTGGCCGGCGGCCCGGAAACCGGTATCAGCGGGCAGGACA
AATCGACGTCCGAGCTGGACAATTACCGCCTGCATGGCGAGCTCAACCTGCCGCTGGAGCTGGGTTTTCACCAGACGCTG
ACCCTCGGTGGCGAGTACGTACGCGAAGAATTGGACGACCCGTACTCCAACGGCCAGGCCTCGTCGTTCGGCGGCATTAC
CCTGCCAGGCTTCGCCGGGGGCGCGCGCAGCGGTGAGTCGGACGCCGATAACTACGCGTTCTACATCGAAGACAACATCG
AGATGACGCCCGACTGGACGCTGACCCCCGGTCTGCGTTTCGACGACAACAGCATCTTCGGCAACAACTGGAGCCCGAGC
CTCAACAGCGCCTACAAGCTGACCGACACCATCACCCTCAAGGGCGGTGTCGCCAAGGCCTTCAAGGCGCCCAACCTGTA
TCAGTCCAACCCCAACTACATCTACTTCACCAAGGGCAACGGCTGCCCGGATGGTTCGGGCGGCGGCGGTGGCTGCTACA
TCCTCGGCAACCCGAATCTGGAGGCGGAAACCAGCATCAACAAGGAGCTGGGCATCGCTTTCGATGACGCCGGCTGGGTC
GCCGGGCTGACCTATTTCCACAACGACTACAAGAACAAGGTCGTGGCTGGAATGGGCGATGGTTCCGATCCCATTCAGGT
GGTTCCGGGCGCAGGCAATTACGCCGAGGTTTACCAGTGGGTCAATGCGCCCAAGGCAATCGTCTCGGGTTGGGAGGGCA
ACCTCACCATTCCGCTGCTGGGCAACCAGGGCGAGACGCTTAGCTGGAGCAACAACTTCACCTACATGATCCAGAACAAG
AACAAGAGCACCGGGGAACCGCTGTCGGTGATTCCCAAGTACACGGTCAACTCGATGCTCGACTGGAGCGTGACCCAAGC
CCTGGACCTCTCGCTGATCGTCACCCACTACGGCAAACAGGAACCGCGGCGCCTGACCAGTCAGGGCAGCGCCGCCACCG
GTGATGCGTTGCGGGCGAGGGACCCGTACACGCTCGTGGGCCTCAGCGCCAACTACGAGCTGAATGAAAATTGGCGTTTC
GGCGCCGGTATCAACAATCTGTTCGACAAGCAGATTCGTCGCGAAAGCATTGCCGGCGGCGAGGGTGCCAACACCTACAA
CGAGCCGGGCCGGGCGTTCTATGTGTCGGCAACCACCTCGTTCTGA

Protein sequence :
MNPNYKPSLLATAVMVAFSAPTAVTAQTTEITLDEAAASEGVQAQQGSQGLEIGETRIIGTAEQELKQASGVSIITADDI
QRHPPANDLSEIIRRMPGVNLTGNSASGQFGNSRQIDLRGMGPENTLILIDGRPVASRNAVRMGRSGERNGRGDSNWVPA
EAIERIEVLRGPAAARYGSGAAGGVVNIITKAPGKTVSGSITAYTNIPENSDEGATRRLSFNTAGPLTDNLSFRVYGNLN
KTEADDAALNDDYAVGSNPAPAGREGVRNKDINTLLRWDVTQEQTLEFETGFSRQGNIYAGERAQDHASTIGNTNGLLGR
ETNTMYRQTAAITHRGDWDIGTSQIGISYENTRNRRMAEALAGGPETGISGQDKSTSELDNYRLHGELNLPLELGFHQTL
TLGGEYVREELDDPYSNGQASSFGGITLPGFAGGARSGESDADNYAFYIEDNIEMTPDWTLTPGLRFDDNSIFGNNWSPS
LNSAYKLTDTITLKGGVAKAFKAPNLYQSNPNYIYFTKGNGCPDGSGGGGGCYILGNPNLEAETSINKELGIAFDDAGWV
AGLTYFHNDYKNKVVAGMGDGSDPIQVVPGAGNYAEVYQWVNAPKAIVSGWEGNLTIPLLGNQGETLSWSNNFTYMIQNK
NKSTGEPLSVIPKYTVNSMLDWSVTQALDLSLIVTHYGKQEPRRLTSQGSAATGDALRARDPYTLVGLSANYELNENWRF
GAGINNLFDKQIRRESIAGGEGANTYNEPGRAFYVSATTSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 3e-135 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1489 YP_004473559.1 TonB-dependent siderophore receptor VFG0935 Protein 3e-135 51
Psefu_1489 YP_004473559.1 TonB-dependent siderophore receptor VFG1650 Protein 2e-135 51
Psefu_1489 YP_004473559.1 TonB-dependent siderophore receptor VFG0923 Protein 4e-139 49