Gene Information

Name : Psefu_1958 (Psefu_1958)
Accession : YP_004474025.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 2088976 - 2089743 bp
Length : 768 bp
Strand : +
Note : KEGG: psa:PST_2553 heme exporter protein CcmC; TIGRFAM: Cytochrome c-type biogenesis protein CcmC; PFAM: Cytochrome c assembly protein

DNA sequence : 
ATGAGTGACCTGATGAACTGGACATGGTTTCACAAGCTGGGTTCGCCCAAATGGTTCTACGAAATCAGTGGCCGCTGGTT
GCCTTGGCTGACCGTCGCCGCGGCCGTGCTGCTGGCCGTGGGCACCGTCTGGGGCTTGGCCTTCGCGCCGCCGGATTACC
AGCAGGGCAACAGTTTCCGGATCATCTACATCCATGTGCCGGCGGCGTTCCTGGCCCAGTCGATCTACGTGATGCTGGCG
GTGGCCGGGGTGGTCGGCCTGGTGTGGAAGATGAAGCTGGCCGACGTCGCCCTGCAGCAGGCTGCCCCCGTGGGCGCCTG
GATGACCGCCATCGCGCTGATCACCGGCGCCGTGTGGGGCAAGCCGACCTGGGGCACCTACTGGATCTGGGATGCGCGCC
TGACCTCGATGCTGATCCTGCTGTTCCTGTACTTCGGCGTCATCGCCCTCGGCCAGGCGATCAGCAACCGCGACAGCGCC
GCCAAGGCCACCGCAGTGCTGGCAGTGGTCGGGGTGATCAACATCCCGATCATCAAGTACTCGGTGGAGTGGTGGAACAC
CCTGCACCAGCCGGCCACCTTCAGCGTCATCGACAAGCCGGCGATGCCGGTGCAGATGTGGCTGCCGCTGCTGATCATGG
TGCTGGGTTTCTATTGCTTCTTCGCGGCGGTGCTGCTGATGCGCATGCGCCTCGAAGTGCTGCGCCGTGAAGCACGCAGC
AGCTGGGTGAAAACCGAAATCCGCGCACTGGTGGAGGGCAAACGATGA

Protein sequence : 
MSDLMNWTWFHKLGSPKWFYEISGRWLPWLTVAAAVLLAVGTVWGLAFAPPDYQQGNSFRIIYIHVPAAFLAQSIYVMLA
VAGVVGLVWKMKLADVALQQAAPVGAWMTAIALITGAVWGKPTWGTYWIWDARLTSMLILLFLYFGVIALGQAISNRDSA
AKATAVLAVVGVINIPIIKYSVEWWNTLHQPATFSVIDKPAMPVQMWLPLLIMVLGFYCFFAAVLLMRMRLEVLRREARS
SWVKTEIRALVEGKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 7e-33 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psefu_1958 YP_004474025.1 heme exporter protein CcmC VFG1856 Protein 1e-35 52