Gene Information

Name : Psefu_2260 (Psefu_2260)
Accession : YP_004474321.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2425966 - 2426418 bp
Length : 453 bp
Strand : +
Note : HAMAP: ribonuclease H; KEGG: psp:PSPPH_1712 ribonuclease H; PFAM: ribonuclease H domain

DNA sequence :
ATGTCCGATCAAGTTGAGCTTTACACCGACGGTGCCTGCAAGGGCAATCCGGGCGTCGGTGGCTGGGGCGCATTGCTGGT
GTTCCAGGGCGTCGAGAAGGAATTGTGGGGCGGCGAGGCCGTGACCACCAACAACCGTATGGAGCTGATGGGCGCGATTC
GCGGCCTGGCGGAACTCAAGCGGCCGTGCAACGTACGCCTGGTCACCGACTCGCAATACGTGATGAAAGGCATCAAGGAA
TGGATGCCCAACTGGAAGAAACGCGGCTGGAAAACTGCCTCGAAGGAGCCGGTGAAGAATGCCGACCTCTGGCAGCAGCT
GGATGAGCAGGTCAATCGGCACAATGTGACCTGGGAATGGGTGCGCGGCCATATCGGCCACCCCGGCAACGAGCGGGCCG
ATCAGCTGGCCAACCGTGGCGTCGAAGATATCAGGAGCATGAAACGTGCGTAG

Protein sequence :
MSDQVELYTDGACKGNPGVGGWGALLVFQGVEKELWGGEAVTTNNRMELMGAIRGLAELKRPCNVRLVTDSQYVMKGIKE
WMPNWKKRGWKTASKEPVKNADLWQQLDEQVNRHNVTWEWVRGHIGHPGNERADQLANRGVEDIRSMKRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 2e-38 57