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Name : Psefu_3310 (Psefu_3310) Accession : YP_004475366.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 3560553 - 3562421 bp Length : 1869 bp Strand : - Note : KEGG: pmy:Pmen_3518 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal DNA sequence : ATGCTCAACAAATACCCTTTGTGGAAGTACCTGCTGATCGCAGCTGTGCTGATCGTCAGTCTGATTTATTCCGCACCCAA TCTTTACCCCGATGACCCGGCGATCCAGATCAGCGGGGCCAGTTCGGCGCAGACCATCACCGAGGCCGATCTCGAGCGCG TCAGCAAGGCGCTGACCGAGGCGGGGCTTGAGGTCAAGGCGGCGAGCGTTGGCGAGCACGGCCGTAGCGGCCTGATTCGT TTGGTCAGCCAGGGCGACCAGCTGCCGGCCAAGGATGTCGTGCGCAAGGTACTTGGTGACAACTTCGTGGTAGCCCTGAA CCTGGCCCAGACCACTCCCGAGTGGCTGCGCAAGGTTGGCGCCAGCCCGATGAAACTCGGTCTCGACCTCTCCGGCGGTG TGCACTTCCTGCTCGAAGTCGACATGGACAAGGCCCTGGAAGTCCGTCGCCAGGTCTACGAGGGTGAGCTCAAGAGCCTG CTGCGCAAGGAGCGTGTGCGTTATCGCAGCATGCCGCAGCAAAGTGGCGCCATTCAGCTGGGCTTCGCTGATGCCGACAC CCTGGCCAAGGCCGAACAGCTGATCCGCAAGGATTACAAGGATTTCAATCTCGAGGCGCAGGAGCGTGGCGGTCAGCAAG TGCTGCGCGTGACCATGACGCCGGCCAAGATCGCGGAAATTCGCGAGTACTCGATTCGTCAGAACCTGACCACGGTGCGC AACCGGGTCAACGAACTTGGCGTCGCCGAGCCGCTGGTGCAGCGCCAGGGCGCCAACCGCATCGTGGTCGAGCTGCCGGG CGTGCAGGACACCGCCGAAGCCAAGCGTATTCTCGGCAAGACCGCCAACCTGGAATTCCGTCTGGCGGCCGACCCGAATG CGCCGCGCGGCACCACCGAGCAGTTCGGCTTCCGCGAGGAAGGTCGCCCGCCGGTTCAGCTCGAGCGTGAGCTGATCATC ACCGGTGACCAGGTCACCGATGCTCAGGCCAGTTTCGACGAGAACGGCCGCCCGCAGGTCAACATCCGTCTGGATGGCCA TGGCGGCGACCTGATGAACCGCGCCACCCGCAGCAACGTGGGTCGCAGCATGGCGGTGATCTTCATCGAGCAACGCCCGC TGACTCGCTACGTGAAGCAGATGGTCGACGGCGTCGAGAAGGAAGTGCAGGTCGACTCCTTCAAGGAGGAGAAGCAGATC ATCAGCCTGGCGACCATTCAGTCGCCGCTGGGCAGCCAGTTCCGCATCACCGGCCTGAACGGCCAGGGTGAGTCCTCCGA GCTGGCGCTGCTGCTGCGTGCCGGTGGTCTGGCCGCACCGATGTACTTCGCTGAAGAGCGCACCATCGGCCCGAGCCTGG GTGCCGAAAATATCGTCAAGGGGATCGAGTCCACCGAGTGGGCGATGATCTTCGTGTCGCTGTTCATGATCTGCATCTAC CGTTTCTTCGGTTTCCTGGCCACCATCGCCCTGGCGTTCAACCTGACCCTGCTGGTCGGGCTGATGTCGGTGATCGGTGC CACCCTGACCCTGCCGGGTATCGCCGGTATCGTGCTGACGCTGGGTATGGCGGTCGACGCCAACGTACTGATCTACTCGC GTATTCGCGAAGAGCTCAATAACGGCCTGTCGGTACAGCGCGCCATCCACGAAGGCTTCGACCGTGCCTACACCGCGATT CTCGACAGTAACCTGACCACGCTGCTGGTCGGTGCGATTCTGTTCGGGCTGGGTACCGGGCCGATCAAGGGTTTCGCCGT CACGCTGTCGATCGGGATCATCACCTCGATGTTCACCGCGATCATGTTCACCCGAGGCATGGTCAACCTGATCTTCGGTG GCCGTAACTTCAAGAAACTGTGGATTTGA Protein sequence : MLNKYPLWKYLLIAAVLIVSLIYSAPNLYPDDPAIQISGASSAQTITEADLERVSKALTEAGLEVKAASVGEHGRSGLIR LVSQGDQLPAKDVVRKVLGDNFVVALNLAQTTPEWLRKVGASPMKLGLDLSGGVHFLLEVDMDKALEVRRQVYEGELKSL LRKERVRYRSMPQQSGAIQLGFADADTLAKAEQLIRKDYKDFNLEAQERGGQQVLRVTMTPAKIAEIREYSIRQNLTTVR NRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRLAADPNAPRGTTEQFGFREEGRPPVQLERELII TGDQVTDAQASFDENGRPQVNIRLDGHGGDLMNRATRSNVGRSMAVIFIEQRPLTRYVKQMVDGVEKEVQVDSFKEEKQI ISLATIQSPLGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGAENIVKGIESTEWAMIFVSLFMICIY RFFGFLATIALAFNLTLLVGLMSVIGATLTLPGIAGIVLTLGMAVDANVLIYSRIREELNNGLSVQRAIHEGFDRAYTAI LDSNLTTLLVGAILFGLGTGPIKGFAVTLSIGIITSMFTAIMFTRGMVNLIFGGRNFKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 77 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 77 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 77 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 77 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 0.0 | 77 |
