Gene Information

Name : Psefu_3855 (Psefu_3855)
Accession : YP_004475905.1
Strain : Pseudomonas fulva 12-X
Genome accession: NC_015556
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG2225
EC number : 2.3.3.9
Position : 4160451 - 4162628 bp
Length : 2178 bp
Strand : +
Note : PFAM: Malate synthase; TIGRFAM: Malate synthase G; HAMAP: Malate synthase G; KEGG: pmy:Pmen_4096 malate synthase G

DNA sequence :
ATGACTGAGCGTGTTCGAGTCGGTGGCCTGCAGGTCGCCAAGGTGCTGTTCGATTTCATCAACAACGAAGCCATCCCCGG
CAGCGGCGTGACGGCCGATGCGTTCTGGAGCGGCGCCGATGCCGTGTTCCGTGACCTGGCGCCGAAGAACCGCGCGCTGC
TCGACAAGCGCGACCAGCTGCAGGCGCAGATCGACGACTGGCACCGCGAGCGGGCCGGCAAGCCCCACGACGCGGCGGCC
TACAAAACCTTCCTGCAGCAGATCGGCTACCTGCAGCCGCAGCCTGAGCACGTGCAGGCCAGCACCGAGAACGTCGACGA
CGAGATCGCCCGCATGGCCGGCCCGCAACTGGTGGTGCCGGTGATGAACGCACGCTTCGCACTCAACGCCAGCAACGCCC
GCTGGGGCTCGCTGTACGACGCGCTGTACGGCACCGATGCGATCAGCGAAGAAGGCGGCGCCGAAAAGGGCAAGGGCTAC
AACCGCGTACGCGGTGACAAGGTGATCGCCGCCGCGCGCGCCTTCCTCGATGAAAGCGCGCCGCTGGCCACCGGCTCCCA
CGCCGAGGCCACCGGCTACCGCATCGAGGGCGACAAACTGCTGGTCACCCTGGCCAATGGCGACATCACCGGCCTGCGCG
AGGCTGGCCAGCTGGTCGGTTTCCAGGGCGAGGCCGCTGCGCCCATCGCCATTCTGCTCAAGCACAACGGCCTGCATTTC
GAGATCCAGATCGACGCCGCGAGCCCGATCGGCAGCACCGACGCCGCCGGCGTGAAGGACGTGCTGATGGAGTCGGCGCT
GACCACCATCATGGACTGCGAAGACTCGGTGGCGGCGGTCGATGCCGACGACAAGACCGTTATCTACCGCAACTGGCTGG
GCCTGATGAAGGGCGACCTCAGCGAGGAAGTCAGCAAGGGCGGTAGCACCTTCACCCGCACCATGAACCCGGATCGCGTC
TACACCCGCCCGAACGGCGGCGAGCTCACCCTGCACGGGCGCAGCCTGCTGTTCGTGCGCAACGTCGGCCACCTGATGAC
CAACCCGGCGGTACTCGACGCCAGCGGCAACGAACTGCCCGAAGGCATTCTCGATGCGCTGTGCACCAGCCTCGCCGCGC
TGCACAACCTCAACGGCAACAACAGCCGCGCCAACAGCCGCACCGGCTCGGTGTACATCGTCAAACCGAAGATGCATGGC
GCGGAAGAAGTCGCCTTCACCAGCGAACTGTTCGGCCGTGTCGAGCAGGTGCTGGGCCTGGCGCGCAATACGCTCAAGGT
CGGCATCATGGACGAGGAGCGGCGCACCACCGTCAACCTAAAGGCCTGCATCGCCGCGGCCAGCGAGCGCGTGGTGTTCA
TCAACACCGGTTTCCTCGACCGCACCGGCGACGAGATCCACACCTCCATGGAAGCCGGCGCCATGGTGCGCAAGGCCGCC
ATGAAGAGCGAGAAGTGGATCAGCGCCTACGAGAACAACAACGTCGACGTCGGCCTGGCCAGCGGCCTGCAGGGCCGTGC
ACAGATCGGCAAGGGCATGTGGGCAATGCCCGACCTGATGGCCGCCATGCTCGAACAGAAGATCGGCCACCCGCTGGCTG
GCGCCAACACCGCCTGGGTGCCCTCGCCGACCGCTGCCACCCTGCACGCACTGCACTATCACAAGGTCGACGTGTTCGCC
CGCCAGGCCGAGCTGACCAAGCGAACCCCGGCTTCGCTGGATGAAATCCTCAGCATTCCGCTGGCGCCAGAAACCAACTG
GAGCGCCGAGGAAATCCGCAACGAGCTGGACAACAACGCCCAGGGCATCCTCGGCTACGTGGTGCGCTGGATCGACCAGG
GCGTCGGCTGCTCCAAGGTGCCGGACATCAACGACATCGGTCTGATGGAAGACCGCGCCACCCTGCGCATTTCCAGTCAG
CTACTGGCCAACTGGCTGCGCCACGGCGTGGTCAGCGAAGCGCAGGTGCTGGAAAGCCTCAAGCGCATGGCGCCGGTAGT
GGACCGGCAGAATGCCGGCGATGCGTTGTACCGCCCGATGGCGCCGGACTTCGACAGCAACATCGCCTTCCAGGCGGCCG
TGGAGCTGGTACTCGAAGGTGCCAAGCAGCCCAACGGCTATACCGAGCCGGTGCTGCATCGCCGTCGTCGTGAACTGAAG
GCCAGCCTGGCGCGCTAA

Protein sequence :
MTERVRVGGLQVAKVLFDFINNEAIPGSGVTADAFWSGADAVFRDLAPKNRALLDKRDQLQAQIDDWHRERAGKPHDAAA
YKTFLQQIGYLQPQPEHVQASTENVDDEIARMAGPQLVVPVMNARFALNASNARWGSLYDALYGTDAISEEGGAEKGKGY
NRVRGDKVIAAARAFLDESAPLATGSHAEATGYRIEGDKLLVTLANGDITGLREAGQLVGFQGEAAAPIAILLKHNGLHF
EIQIDAASPIGSTDAAGVKDVLMESALTTIMDCEDSVAAVDADDKTVIYRNWLGLMKGDLSEEVSKGGSTFTRTMNPDRV
YTRPNGGELTLHGRSLLFVRNVGHLMTNPAVLDASGNELPEGILDALCTSLAALHNLNGNNSRANSRTGSVYIVKPKMHG
AEEVAFTSELFGRVEQVLGLARNTLKVGIMDEERRTTVNLKACIAAASERVVFINTGFLDRTGDEIHTSMEAGAMVRKAA
MKSEKWISAYENNNVDVGLASGLQGRAQIGKGMWAMPDLMAAMLEQKIGHPLAGANTAWVPSPTAATLHALHYHKVDVFA
RQAELTKRTPASLDEILSIPLAPETNWSAEEIRNELDNNAQGILGYVVRWIDQGVGCSKVPDINDIGLMEDRATLRISSQ
LLANWLRHGVVSEAQVLESLKRMAPVVDRQNAGDALYRPMAPDFDSNIAFQAAVELVLEGAKQPNGYTEPVLHRRRRELK
ASLAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 59