Name : Psefu_4393 (Psefu_4393) Accession : YP_004476439.1 Strain : Pseudomonas fulva 12-X Genome accession: NC_015556 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 4795713 - 4796210 bp Length : 498 bp Strand : - Note : KEGG: avn:Avin_44150 FecI-like iron uptake RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 DNA sequence : ATGCCATCCGGACTCGCCCTCGATAGGCTGTATATCGAACACCACGGCTGGCTGCAGGGCTGGCTGCAGGCGCGCCTGAA CAACCGCGCCGATGCTGCCGACCTGGCCCAGGACACCTTCCTGCGTCTGCTGCAGCGCCGCATCGGCGAGCTGGCTGAGC CGCGCGCCTACCTGCGCACGGTGGCACGCGGGCTGGTCATCGACCTGTGGCGCCGTCGTGATATCGAGCGCGCCTGGCTG GAAACCATCGCTCAGTTGCCGGAGCACCAGGCCCCCTCTCCGGAAACCGGCCTGCTGATCATCGAGTCGCTGGTCGCCAT CGACAGTCTGCTGGACGAGCTGCCGGCTGCAGTGCGCGAAGCCTTTCTGCTGGCCCAGTTGGACGGCATGACCTGCCCGG CAATCGCCCAGCGCCTGGGCGTGTCGCTGTCCACTGTCGAGCGTTACATCGCCAAGGCACTGCGCCATTGCTACCGGCTG ACGTTCGAGCAGCCATGA Protein sequence : MPSGLALDRLYIEHHGWLQGWLQARLNNRADAADLAQDTFLRLLQRRIGELAEPRAYLRTVARGLVIDLWRRRDIERAWL ETIAQLPEHQAPSPETGLLIIESLVAIDSLLDELPAAVREAFLLAQLDGMTCPAIAQRLGVSLSTVERYIAKALRHCYRL TFEQP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-34 | 47 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Psefu_4393 | YP_004476439.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 8e-35 | 47 |