Gene Information

Name : Mar181_3086 (Mar181_3086)
Accession : YP_004483032.1
Strain : Marinomonas posidonica IVIA-Po-181
Genome accession: NC_015559
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3401984 - 3402511 bp
Length : 528 bp
Strand : +
Note : KEGG: mms:mma_3485 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGCCGCACAATCCGATCTCAAACGTGCAACATGACGTAATGCATTCTCTGTATATGAATCACCACAATTGGTTATACAC
ATGGATACGTCGACGTTTGGACAATCAATTTGATGCGGCTGATTTAACTCAAGATACTTTTTTACGCATTCACGCTAAAC
AGAATGTCGATTTAATTAATGAGCCTAAAGCCTATTTAGCGACAATTGCGAAGGGTCTTGTTAGTCATTTTTATAGACGT
AAATCATTAGAGCAAACCTATCTAGAATATCTAGCAAAACAGCCAGAAAATTTAGCCCCTTCAACAGAAAACCAATTTAT
TATTTTACAAACTTTAGAAGCAATAGATGCATTGCTTAATACCCTCCCAGGCCATGTCAAAGAAGTCTTTTTAATGTCGC
AGCTAGAGGGAAAAAAATATCAACAAATCGCCGATGAGATGACTCTGTCCCTCGCCACAGTAAAGCGATATATGAAGCAA
GCTTATGTTCATTGTTTTGTGTTGATGGAGAACGATTTTTTTGAATAA

Protein sequence : 
MPHNPISNVQHDVMHSLYMNHHNWLYTWIRRRLDNQFDAADLTQDTFLRIHAKQNVDLINEPKAYLATIAKGLVSHFYRR
KSLEQTYLEYLAKQPENLAPSTENQFIILQTLEAIDALLNTLPGHVKEVFLMSQLEGKKYQQIADEMTLSLATVKRYMKQ
AYVHCFVLMENDFFE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mar181_3086 YP_004483032.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 4e-34 44