Gene Information

Name : DelCs14_1557 (DelCs14_1557)
Accession : YP_004486944.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 1760791 - 1761306 bp
Length : 516 bp
Strand : -
Note : KEGG: mms:mma_0754 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
GTGTCCTGTCCCGCCGTGACTCCCCACCAGGCCCTTGCCCATCTCTACCAGCAGCACCATGGCTGGCTGCGCACCTGGCT
GCAGCGCCGGCTGGGCCATGCAGGCGATGCGGCAGATTTCGCACAGGACACCTACGTGCGCGTGATGGAGTCCCGCACCG
AACTGTCCGAGATCCGGGAGCCCCGCGCCTTCCTCACCACGGTGGCCAAGCGCGTGATGGCCAACCATCTGCGCCGCCGA
GAAATTGAACGTGCCTATCTGGACACGCTGGCGCTGCAGCCCGAGCCGCTGGCGCCCTCGCCCGAGGAACGCGCCATCGT
GCTGGAGACGCTGTGCGAGCTGGACCGCCTGCTCGACGGCCTGCCGCCCAAGGTGCGCGCGGCCTTTTTGCACGCCCAGC
TGGACGGCATGGCCTATGCCGAGATCGCCTTGCTGCTGCAGGTCTCGGTCAGCTCGGTCAAGCAGTACATGGCGCGCGCC
ATCCGGCATTGCTACTTCCCGGAACATGCGGCATGA

Protein sequence : 
MSCPAVTPHQALAHLYQQHHGWLRTWLQRRLGHAGDAADFAQDTYVRVMESRTELSEIREPRAFLTTVAKRVMANHLRRR
EIERAYLDTLALQPEPLAPSPEERAIVLETLCELDRLLDGLPPKVRAAFLHAQLDGMAYAEIALLLQVSVSSVKQYMARA
IRHCYFPEHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-36 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1557 YP_004486944.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 1e-36 61