Gene Information

Name : DelCs14_1876 (DelCs14_1876)
Accession : YP_004487251.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2109481 - 2109984 bp
Length : 504 bp
Strand : +
Note : KEGG: axy:AXYL_02541 RNA polymerase sigma factor FecI 5; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2

DNA sequence : 
TTGCCCGCCGCCCCCGCCGCTTTGCACCAAGAGGTCGATACGCTGTACCGCGTCCATCATGGCTGGCTCCAGGGCTGGCT
GCGGCGGCGATTGGGCAATTCCACGGAGGCGGCCGATCTGGCGCAGGACACTTTCATGCGCCTGCTCACGCGCAGCGAGC
CCATTGCCGCACGCGAGCCGCGTGCCTTTCTGACCACGGTGGCGCAGGGCGTGGTGGCCAATTTCATGCGGCGCAGGCAG
ATCGAAGAGGCGTACCTGGCCACGCTGGCGCATTTGCCCGAGCCGCAGGTGCCGGGCCCCGAGACGCGCGCCATCCTGCT
GGAGACGCTGGTCGAGCTGGACCGCCGCCTGGACACGCTGGCACCCACCGTGCGCCGTGCCTTCCTGCTGTCGCAGCTCG
ACGGCATGAAGCAGGCCGACATCGCGGCCGAGCTGCAGCTGTCGCTGGCCACGGTGCAGCGCCATATCGCCAAGGCCGCG
CACTGCTGCTTCTTCGGCGGTTGA

Protein sequence : 
MPAAPAALHQEVDTLYRVHHGWLQGWLRRRLGNSTEAADLAQDTFMRLLTRSEPIAAREPRAFLTTVAQGVVANFMRRRQ
IEEAYLATLAHLPEPQVPGPETRAILLETLVELDRRLDTLAPTVRRAFLLSQLDGMKQADIAAELQLSLATVQRHIAKAA
HCCFFGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 8e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_1876 YP_004487251.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 3e-32 46