Gene Information

Name : DelCs14_1956 (DelCs14_1956)
Accession : YP_004487331.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 2208044 - 2208490 bp
Length : 447 bp
Strand : +
Note : HAMAP: Ribonuclease H; KEGG: dac:Daci_4895 ribonuclease H; PFAM: Ribonuclease H

DNA sequence :
TTGAATCAAGTTGTTATCTACACGGACGGCGCCTGCAAGGGCAATCCGGGTCCCGGCGGCTGGGGCGTGGTGCTGGAGGC
CGGCAGCGCCAGGAAAGAGCTGTTCGGCGGCGAGCTGAACACGACCAACAACCGCATGGAGATGATGGCCGTGATCGAGG
CGCTGTCCGCGCTCAGGCGGCCCTGCGATGTGGTGCTCTACATCGACAGCCAGTACGTGCTCAAGGGCATCACCGAATGG
ATCCATGGCTGGAAGGCCAAGGGCTGGAAGACGGCCTCCAAGGAGCCGGTCAAGAACGTCGAGCTGTGGCAGCGGCTGGA
CGCCCTGGTCCAGGGTGGCGGCCACCGCATCGACTGGCGCTGGGTCAAGGGCCACGCAGGCGACCCTGGCAACGAGCGGG
CAGACGCCCTGGCCAACAAGGGCGTGGACCAGGCACTGGGGCGCTGA

Protein sequence :
MNQVVIYTDGACKGNPGPGGWGVVLEAGSARKELFGGELNTTNNRMEMMAVIEALSALRRPCDVVLYIDSQYVLKGITEW
IHGWKAKGWKTASKEPVKNVELWQRLDALVQGGGHRIDWRWVKGHAGDPGNERADALANKGVDQALGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 7e-34 55