Gene Information

Name : DelCs14_2017 (DelCs14_2017)
Accession : YP_004487392.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2280325 - 2280840 bp
Length : 516 bp
Strand : -
Note : KEGG: hse:Hsero_2433 RNA polymerase sigma-70 factor, ECF subfamily (sigma-24) transcription regulator protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2

DNA sequence : 
ATGGCCGCCGCGCCTTCGCACCCCGACATCGCCCTGCTCTACAGCGACCACCACGGCTGGCTGGTGGGCTGGCTCAGGCG
CAGGCTGGGCAATCCCTGCGATGCGGCAGACCTGGCCCAGGACACCTTCGTTCGCGTGCTGGGCAAGCCCCAGTCCCTGC
ATGGCGTGCGCGAGCCGCGCGCCTGGCTCACCACCATCGCCCACGGCCTGGTCGTGGACCACACCCGCCGCGCCGCGCTG
GAGCGCGCCTGCCTGGACGCCATCGCCAGCCTGCCCGAGCCGCTGGCGCCCTCGGCCGAGGAGCGCCATCTGCTGATCGA
ATCCCTGGTGCGCATGGACAACCTGCTGGCCGGCCTGCCGCCCAAGGCCCGCAGCGCCTTTCTGCTCTCTCGCCTGGAAG
GCCTGAGCTACCCGGAAATCGCCCTGCAGCTGGGCGTGTGCCTGAGCTCCGTCGAGAAATACATGGCCACCGCCATACGC
CACTGCCTTGCCCTGCGCAAGGAACTGACGGCGTGA

Protein sequence : 
MAAAPSHPDIALLYSDHHGWLVGWLRRRLGNPCDAADLAQDTFVRVLGKPQSLHGVREPRAWLTTIAHGLVVDHTRRAAL
ERACLDAIASLPEPLAPSAEERHLLIESLVRMDNLLAGLPPKARSAFLLSRLEGLSYPEIALQLGVCLSSVEKYMATAIR
HCLALRKELTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 4e-36 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_2017 YP_004487392.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 2e-36 50