|
Name : DelCs14_2325 (DelCs14_2325) Accession : YP_004487698.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Virulence Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 2660253 - 2662610 bp Length : 2358 bp Strand : + Note : KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Rhs element Vgr protein DNA sequence : ATGACACGCCGAGTCACCATACACACGCCATTGGGCGAGCAGCTGCATTTCCGTGAATTGCGCGGCCAGGAAAACATCAG CCAGCTCTTCAGCCTCGATGTGGAAATGCTCAGCGAAAGCGAAAGCATCGATCCCAAGGCCCTATTGGGCAAAAACGCCA CCATAGAAATAGAAACCCAGGGCGGCGGCAGGCGCTTCATCGACGGCATCGTCACCCGCTTTGGCATGCAGGGCCAGGAC CACCGCCACTACGCCTACAAGGCCCGCCTGAGCCCTTGGCTGTGGCTGGCCACGCGCAAGAGCGACTTTCGCATCTTCCA GAACCAGACCGTGCCCGACATCATCGAGCAGGTATTGGGCGTCTATGGCCATCCCCTGCAAAAGAAACTCACGCGTGCCT ATCGCAGCTGGGACTACTGCGTTCAATACAACGAAAGCGATTGCGACTTTGTCTCGCGATTGATGGAGCACGAAGGCATT TACTACTTCTTCGAGCATGCCTCGGGCCAGCACACCCTGGTGCTGTGCGACGACATCATTGCCTCGCACAGCGTATTGCC CGGGGGCGCCTCCATTCCCTTTTATCCCCCGGAAAAAGCCGCCGCAGGCGATCAGGAAAACATCCACGCCTGGCAGCTGG AGCAGGAAATCAAATCGGGCCGCCATTACAGCGACGACTACGACTTCAAGAAACCCCGGGCCGACCTCACCCACCTGCGG CGCGACCCACCGGGCCACGCCCATGACGGCCACGAAATCTACGAATGGCCAGGCGGCTACACCCAGCTGAGCGACGGCGA GGACTACATCCGCGTGCGCCTGAAGGAAAGCCTCACCGGCCAAAGCCGGGTGCGGGGCCAGTCCTGCCACCGGGCGTTGG CCACGGGCTACACGTTCAGCCTCTACAACTACCCGCGCGGCGACCAGAACCAGCAGTACCTGATCACGGGCCTGAGCTAC CACTTGAAGGAGAACCCCCGCGTCAGTGCCGTGGCCCCGGGCGCCAAGGGCAGCGCCGCGGAAGACGGCTCCTTCCAGCG CTACGAGTTGCAGGCCCAGCCCACGAGTCTTGCCTACACGCCCGCGCGTACCACGCCCAAGCCGCGCACCACGGGCCCGC AGACCGCCGTCGTCGTGGGCCCGGCCGGAGAAGAAATCTGGACCGACGAATACGGCCGCATCAAGGTGCAGTTCCACTGG GACCGGCTGGGCGGCATGAACGAGAACTCCAGCTGCTGGATCCGCGTGGCCACGAACTGGGCGGGCCCGGGGTTCGGGGC CATCTCCATTCCGCGCATAGGCCATGAGGTGGTGGTGGACTTCCTCAACGGCGACCCGGACTACCCGCTGGTCACGGGCT GCGTCTACAACGCGGCCAACATGCCGCCCTGGGCGCTGCCGGCCAACGCCACGCAATCGGGCATCAAGACCAGATCGAGC AAGGGCGGGGCCGCAGGCGCGGGCATGAAGAACGGCCCGGGTGACGCCAACGCCATCCGCTTCGAGGACAAGGCCGGTCA AGAACAGCTGTGGCTGCATGCGCAAAAGGACCAGCTCACCGAAGTCGAGAACGACGAAGACAAATGGGTGGGCAACGACC GGCGCAAGACGGTGGACCGGGACGAGACCAGCGTGATCCACCGCGACCGCACGGAGACCGTGGACCGCGACGAGACCATC ACCGTGCACAACAACCGCACGGAGCGGGTGGACCACAACGAGAAGGTCAGCATTGGCGACAACCGCAACGAAGATGTTGG CATCGACGAGAACATCTCGATCGGCAAGAACCGCAGCAAGACCATCGGCAAGACCGAGACCGACAAGATAGGCCAGAACT GGCACGTCACGGTGGGCCTGCTCAAGACCCAGACCATAGGCATGGCCTACATGCAGAACGTGGGTGTGATGAAGATGATG AACATCGGCGTCAACTACATGGAGAACATCGGCGTGGCCATGCAGACCACGGTCGGCATGAGCCAGAACCTCACCGTGGG GCAGGAGCGCCAGGTCAAGGTCGGCAGCAAGCAAAGCACGGAAGTGGGCTCGCAGTACTCGCTGACCGTGGGCGGTGGTG GCGGGGGTGGTGGCGGCAGCGGTGGTGGCGCGGGAGGCGGCATGGCCATGAACATCACGGCGCCTGGTGGCGGCGGCAGC GGTGGGGGCGGTGGAGGCGGAGGCGGAGGCGGCAAGGCCTCCCAGCTCACCATGGATGGGCAAAGCATCCAGCTCAACGC CGCCAAGATCCGGCTCGAAGCCCAGCAGGAAATCCTGCTGACCTGCGGTGAAAGCACCATCCGCATCACGCCCGGCGACA TCCAGATTCTCTCGCCCACGGACCGGCTCAACTGCTGA Protein sequence : MTRRVTIHTPLGEQLHFRELRGQENISQLFSLDVEMLSESESIDPKALLGKNATIEIETQGGGRRFIDGIVTRFGMQGQD HRHYAYKARLSPWLWLATRKSDFRIFQNQTVPDIIEQVLGVYGHPLQKKLTRAYRSWDYCVQYNESDCDFVSRLMEHEGI YYFFEHASGQHTLVLCDDIIASHSVLPGGASIPFYPPEKAAAGDQENIHAWQLEQEIKSGRHYSDDYDFKKPRADLTHLR RDPPGHAHDGHEIYEWPGGYTQLSDGEDYIRVRLKESLTGQSRVRGQSCHRALATGYTFSLYNYPRGDQNQQYLITGLSY HLKENPRVSAVAPGAKGSAAEDGSFQRYELQAQPTSLAYTPARTTPKPRTTGPQTAVVVGPAGEEIWTDEYGRIKVQFHW DRLGGMNENSSCWIRVATNWAGPGFGAISIPRIGHEVVVDFLNGDPDYPLVTGCVYNAANMPPWALPANATQSGIKTRSS KGGAAGAGMKNGPGDANAIRFEDKAGQEQLWLHAQKDQLTEVENDEDKWVGNDRRKTVDRDETSVIHRDRTETVDRDETI TVHNNRTERVDHNEKVSIGDNRNEDVGIDENISIGKNRSKTIGKTETDKIGQNWHVTVGLLKTQTIGMAYMQNVGVMKMM NIGVNYMENIGVAMQTTVGMSQNLTVGQERQVKVGSKQSTEVGSQYSLTVGGGGGGGGGSGGGAGGGMAMNITAPGGGGS GGGGGGGGGGGKASQLTMDGQSIQLNAAKIRLEAQQEILLTCGESTIRITPGDIQILSPTDRLNC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0319 | NP_454896.1 | Rhs-family protein | Not tested | SPI-6 | Protein | 4e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| DelCs14_2325 | YP_004487698.1 | ImpA family type VI secretion-associated protein | VFG2077 | Protein | 9e-108 | 45 |
