Gene Information

Name : DelCs14_3132 (DelCs14_3132)
Accession : YP_004488489.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3542100 - 3542630 bp
Length : 531 bp
Strand : +
Note : KEGG: bav:BAV0636 RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2

DNA sequence : 
ATGGACGCGCAGATTTCCCAGTCCGCCAAGGCGACAACCAGCGTGGAAAGCCTGTACCACAGCCACCAGAACTGGCTGCA
GGGCTGGTTGCGGCGCCGGTTGGACGACTCCTTCGACGCGGCCGACATGGCGCAGGACGTGTTCATGCGCCTGCTCACCC
GCCAACCCGGCCCTGACGCAACCGGCCTGCGCCAGCCCCGCGCCTACCTGAGCACCATTGCCCATGGCCTGCTGGTGGAC
CACTGGCGCCGCCGCGAGCTGGAACGTGCCTGGCTCGAGACCCTGGCCCTCATGCCCGAGGCGCAGGCCCCCTCGCCGGA
AAGCCGGCTGATCTTCCTGGAAACCCTGGTCGCCATAGACCGCATGCTGGATGCCTTGAAGCCCCGCGTGCGCAGCGCTT
TTCTGTGGGCGCAGCTGGAAGGACTCACCTGCCCGCAGATCGCCGAACGACTGGGCGTGTCCCTGGCCACGGCCGAGCGC
TACATCGCCACGGCCCTGCGCCACTGCTACGCACTGCGCTTCGGGGCATGA

Protein sequence : 
MDAQISQSAKATTSVESLYHSHQNWLQGWLRRRLDDSFDAADMAQDVFMRLLTRQPGPDATGLRQPRAYLSTIAHGLLVD
HWRRRELERAWLETLALMPEAQAPSPESRLIFLETLVAIDRMLDALKPRVRSAFLWAQLEGLTCPQIAERLGVSLATAER
YIATALRHCYALRFGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-30 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_3132 YP_004488489.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 1e-30 48