Gene Information

Name : DelCs14_3280 (DelCs14_3280)
Accession : YP_004488631.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3701618 - 3702598 bp
Length : 981 bp
Strand : +
Note : PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3535 transcriptional regulator CysB-like protein

DNA sequence :
ATGCAGCATAATGGCGCGCTGCACCCAGCTGTCACCGCCATGAACCTGCACCAATTCCGATTCGTCCAAGAAGCGGCGCG
CCGCAACCTCAACCTCACCGAGGCGGCCAAGGCCCTGCACACCTCGCAGCCCGGCGTCTCCAAGGCCATCATCGAGCTGG
AGGAGGAGCTGGGCATCGACATCTTCGCGCGCCACGGCAAGCGCCTCAAGCGCATCACCGAACCCGGCCTGGAGGTGCTC
AAGAGCATCGAACTCATCATGCGCGAGATCGGCAACCTCAAGCGCATCGGCGAGCAGTACAGCGCCCAGGACAGCGGCAC
GCTGTCGATTGCCACCACCCACACCCAGGCCCGCTACGTGCTGCCGCCCGCCGTGGCACGGCTGCGCGACCTTTATCCCA
AGGTCACCATCAGCCTGCACCAGGCCACGCCGGCCGAGGTGGCGCGCATGGTCATCGACGAGATCGCCGACATCGGCATG
GCCACCGAATCCCTGGCCGACTACCCCGATCTCGTCACCCTGCCCTGCTACGAATGGCAGCACGTGCTGGTCATGCCCAC
GGGCCATCCGCTGGCGCAGAAAGAGCGCATCACGCTGGACGACATCGCCCATGAGTCGCTGATCACCTACCACCCCTCTT
TCACCGGGCGCGGCAAGATCGACCAGGCCTTCGCCACGCGCCGGCTGCGTCCGCGCATCGTGCTGGAGGCCATTGACTCC
GACGTGATCAAGACCTACGTGCGCCTGGGCCTGGGCATCGGCATCGTGGCCGAGATGGCCATGCGCGACGATCCGGTCAA
CGACCTCGTGGTCCGCCCCATGGGCCATCTGTTCGGCCAGAGCGTGGCGCGCGTGGCCATCAAGCGTGGCGCCTATCTGC
GCAACTTCGTCTACCGCTTCGCAGAGCTGCTCAGCGACCGCCTGACGCGCGACCTGATCATGCGCGCCATGAGCGGCCAC
GTGCACGACTACGAACTCTGA

Protein sequence :
MQHNGALHPAVTAMNLHQFRFVQEAARRNLNLTEAAKALHTSQPGVSKAIIELEEELGIDIFARHGKRLKRITEPGLEVL
KSIELIMREIGNLKRIGEQYSAQDSGTLSIATTHTQARYVLPPAVARLRDLYPKVTISLHQATPAEVARMVIDEIADIGM
ATESLADYPDLVTLPCYEWQHVLVMPTGHPLAQKERITLDDIAHESLITYHPSFTGRGKIDQAFATRRLRPRIVLEAIDS
DVIKTYVRLGLGIGIVAEMAMRDDPVNDLVVRPMGHLFGQSVARVAIKRGAYLRNFVYRFAELLSDRLTRDLIMRAMSGH
VHDYEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 2e-59 47