Gene Information

Name : DelCs14_3497 (DelCs14_3497)
Accession : YP_004488844.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3961358 - 3961867 bp
Length : 510 bp
Strand : -
Note : KEGG: mms:mma_3493 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGCCTGCCGCCGAAACCTCCCTTCACCGCGAAGTCGCCACGCTCTACACCGACCACCACGGCTGGCTGCAGGGCTGGCT
GCGCAAGAAGCTGGGCGATGTGCACCAGGCGGCCGATCTGGCGCACGACACCTTTGTGCGCCTGCTGGCACGCGACGAGC
CTGTGCAGGCGCGTGAGCCGCGCGCCTTTCTGACCACGGTGGCGCAGCGCGTGCTGGCCAACCACTACCGGCGCCAGCAA
CTGGAGCGCGCGTATCTGGAGGCGCTGGCACAGGCGCCGCAGTCCTTTGCCATCTCGCCCGAGGAGCGCGCGCTGCTGCT
GGAGGCGCTGGACGAGATCGACCGCATGCTCGACGGCCTGCCTGCCCCCGTGCGGCGGGCCTTTCTGATGGCCCAGCTGG
ACGGCATGAAGCAGGCCGACATTGCGCGCGAGCTGGGCCTGTCGCTGACCACCGTCAAGCGCTACCTGGTGCAGGCCGGC
ATGCACTGCTATTTCGCGGTGCAGGCATGA

Protein sequence : 
MPAAETSLHREVATLYTDHHGWLQGWLRKKLGDVHQAADLAHDTFVRLLARDEPVQAREPRAFLTTVAQRVLANHYRRQQ
LERAYLEALAQAPQSFAISPEERALLLEALDEIDRMLDGLPAPVRRAFLMAQLDGMKQADIARELGLSLTTVKRYLVQAG
MHCYFAVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-31 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_3497 YP_004488844.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 1e-31 48