Gene Information

Name : DelCs14_4134 (DelCs14_4134)
Accession : YP_004489471.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 4663212 - 4663730 bp
Length : 519 bp
Strand : -
Note : KEGG: axy:AXYL_05944 RNA polymerase sigma factor FecI 17; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
GTGGCCGCCGCCGAGTTTGCGCTTCAGCAACAAGTCGAAATTCTCTACACCGATCACCACGGCTGGTTGCGCGGCCTGCT
GCGCCGCAAGCTGGGCAATGCCTTTGATGCGGCCGATCTGGCGCACGACGTTTACCTGCAACTGCTGCGCACCGGCCGTG
TTCCGCCGGCCGACGAGCACCGCCGCCATCTCACCCAGATCGCCAACGGCCTGGTGATCGACCTCTACCGGCGCCGCCGC
GTGGAGGCGGCCTATCTTGAAGCGCTGGCCCTGCTGCCCGAGCAGATGGCGCCCTCCGAAGAAACACGTGCCCTGGCGCT
GGAGGCGCTGGTGGAGATCGATGCCGCGTTGAACGGCCTGCCGCCCAAGGCGCGCAAGGCCTTGCTGCTGTGCAAGCTCG
ACGGCATGGCCTACCGCGACATCGCGGCCGAGCTGGGCGTGTCCGTGTCTTCGGTGGAGAAATACATCGCCGCCGGCCTG
CTGGCCTGCTACCAGGCGCTGCACGGCCCGGTGTGCTGA

Protein sequence : 
MAAAEFALQQQVEILYTDHHGWLRGLLRRKLGNAFDAADLAHDVYLQLLRTGRVPPADEHRRHLTQIANGLVIDLYRRRR
VEAAYLEALALLPEQMAPSEETRALALEALVEIDAALNGLPPKARKALLLCKLDGMAYRDIAAELGVSVSSVEKYIAAGL
LACYQALHGPVC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-16 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_4134 YP_004489471.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 4e-17 48