Gene Information

Name : DelCs14_4210 (DelCs14_4210)
Accession : YP_004489544.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 4752497 - 4754659 bp
Length : 2163 bp
Strand : +
Note : KEGG: dac:Daci_2453 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug

DNA sequence :
ATGGTTTCCAGCAATCACTGCGCCACGCTCACACGCTGCGCGGCCGCTGTCGCCGCCGCCCTGCTGTCGCTGCAGGCGTC
GGCACAGGCGCCATCCCCCACCACCACCGCACCCGAGGCCGGCCTGTCCGCCATCACCGTCACGGGCAACTGGCTGGACA
ACCCCACCGAGGAAAAGGTGCTGGACCATGCCGGCGCGCGCACCATCGTCGAACGGGCGCGCATCGAGGAAACCGGCTCC
TCCAGCCTGCGCGACGTGCTGCGCCTGGTGCCCGGCGTGCAGGTGCAGGACAGCAACGGCACGGGCGGCAGCGATGTGTC
CCTGAACATCGGCGTGCGCGGCCTGACGGCGCGCCTGTCGCCGCGCTCGTATGTGCTGATGGACGGCGTGCCCGTCTCCT
ACGCGCCCTACGGCCAGCCCCAGCTGTCGCTGGCGCCCGTGTCGCTGGGCAACCTGGAGTCGGTGGACGTGATCCGCGGC
GCGGGCTCGGTGCGCTACGGCCCCCAGAACGTGGGCGGCATCATCAACTTCGTCACGCGCGCCATTCCCAAGACCTTCGC
GGCCGAGGCCTCGGTGGGCACCGAGATCTACAGCCACGGCGGCAATGCCAAGACCACGCCCAGCCTGTTCGTGGGCGGCA
CCAACGAATCCGGCCTGGGCCTGGCCCTGCTGTACTCGGGCACGCATGGCGACGGCTGGCGCGCAGGCAATGACAAGACC
GACATCGACGACATCCTGCTCAAGGGCGCCTACCGCATCTCGGCCCAGGACGACATCGCCGTCTCGCTGCACCACTTCGA
GGGCTCGGGCCGCATGCCCGGCGGCCTGACCACGGCGCAGTACGCGGCCGACCCGTTCCAGTCCACACGCTCCTACGACA
GCTTCGACGGCCGCCGCACCGATGCCTCGTTCAAGTACAACCACAAGGACGGGCGCAACAACTTCGAGGTGCTGGGCTAC
TACGTGGACTCGTTCCGCGGCAGCTACATCGAGCAGGACAACGCCAACCAGCGCCGCCTGACGGCCGCGCCGCGCAGCTA
CCACTACTTCGGCATCGAGCCGCGCTACTCGCGCCTGTTCGAGACCGGCTCCGTGGTGCAGGAAGTCAGCGTGGGCTACC
GCTACCTCAAGGAAAGCAGTTCCGAGGTCGCGCTGCGCACCGCCTACTACAACCCCGCCACCATGGCCAACGCCATGGCC
CTGCCGATCACGCCCTACCAGACCAGCCAGGGCGGCACCACGGCCCATGCCTTCTACATCGATGACCGCATCGACATCGG
CAACTGGACCATCACGCCCGGCGTGCGCTACGAACGCATCAACTCCTTCAACAACGTCAGCAACCTGGGCGCCGATGGCA
GCACCGTCACCAGCCAGCTGTTCCCCAAGGCCGATGCACGCGAGTTCCTGCCCACGCTGTCCGTGCTCTACCGCATGAAT
GCGCAGTGGTCGCTGTTCGCCAACGCGGGCAAGTCCTTCGGCCCCCAGCAGTATGCGCAGCTGGCCCAGACCGAGCGCGG
CCTGCATCCCGAATCGGCCAAGACCTATGAGGTGGGCACGCACTACAACAGCCCGGCGCTGAACGCCGAGCTGACGCTGT
TCAACATCGACTTCGACAAGGAACTGCTGCTGACCCGCGTGGGCGTGGACGGCATCTGGACCGACCTGGGCGCCACGCGC
CACCGAGGCATCGAGTCCTCGCTGCGCTACGACCTGGGCCAGTGGAATGCCGCGCTCAAGGGGCTGACGGCGGGTGTGTC
CTATACCTACACCGAGGCCGTCTCGCGCGCTGGCGATTTCGCGGGGCGCGACCTGCCGCTGTACTCGCGCCACACGGGCC
AGCTGTGGGCGCGCTATGCGCTGGGGCAGTGGACGCTGAATGCGGACCTGGCTGCGCAATCGAAGCAGCGCTCTCCGGGG
TCGGGCACGCAGTATGTGACGCAGGAAGATGCTGCGGGGCGGCTGGGTGATATTCCCGGGTTTGCGACCGTGGGCCTGCG
TGCGGGCTATGACTTTGGCAAGTCGCTGAGCAATCTGCGGGTGGCTGTGGGGGTCAAGAATCTGTTTGATCGCAGGTACT
ACACGCGGTCTACGGACAACAACGGGGGCAAGTATGTGGGGATGCCTCGGACGTTGTATGTGCAGGGGACGTTGCCGTTC
TGA

Protein sequence :
MVSSNHCATLTRCAAAVAAALLSLQASAQAPSPTTTAPEAGLSAITVTGNWLDNPTEEKVLDHAGARTIVERARIEETGS
SSLRDVLRLVPGVQVQDSNGTGGSDVSLNIGVRGLTARLSPRSYVLMDGVPVSYAPYGQPQLSLAPVSLGNLESVDVIRG
AGSVRYGPQNVGGIINFVTRAIPKTFAAEASVGTEIYSHGGNAKTTPSLFVGGTNESGLGLALLYSGTHGDGWRAGNDKT
DIDDILLKGAYRISAQDDIAVSLHHFEGSGRMPGGLTTAQYAADPFQSTRSYDSFDGRRTDASFKYNHKDGRNNFEVLGY
YVDSFRGSYIEQDNANQRRLTAAPRSYHYFGIEPRYSRLFETGSVVQEVSVGYRYLKESSSEVALRTAYYNPATMANAMA
LPITPYQTSQGGTTAHAFYIDDRIDIGNWTITPGVRYERINSFNNVSNLGADGSTVTSQLFPKADAREFLPTLSVLYRMN
AQWSLFANAGKSFGPQQYAQLAQTERGLHPESAKTYEVGTHYNSPALNAELTLFNIDFDKELLLTRVGVDGIWTDLGATR
HRGIESSLRYDLGQWNAALKGLTAGVSYTYTEAVSRAGDFAGRDLPLYSRHTGQLWARYALGQWTLNADLAAQSKQRSPG
SGTQYVTQEDAAGRLGDIPGFATVGLRAGYDFGKSLSNLRVAVGVKNLFDRRYYTRSTDNNGGKYVGMPRTLYVQGTLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 4e-137 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_4210 YP_004489544.1 TonB-dependent siderophore receptor VFG1047 Protein 2e-137 45