Gene Information

Name : DelCs14_4741 (DelCs14_4741)
Accession : YP_004490069.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 5341756 - 5342268 bp
Length : 513 bp
Strand : +
Note : KEGG: mep:MPQ_2694 RNA polymerase, sigma-24 subunit, ecf subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGCCCTCCCCGTCCACCGCCGACCCGGTGCACACGCTCTACGTCGCCCACCATGACTGGCTGCACGGCTGGCTGCGGCG
CAAGCTGGGCAATTCCCACCAGGCCGAGGACCTGGCGCACGACACCTTCGAGCGCGTGGTGGCGTCCCGGCAGGCCCATG
CCATCCAGGAGCCGCGTGCCTACCTGACCACGCTGGCCCAGCGGGTGCTCTACAACTTCTGGCGCAGGCGCGAACTGGAG
CAGGCCTGGCTCGATGCGCTGGCCACGCTGCCCGAGGAAGTGGCGCCCTCCCCCGAGGACTACGCCCTGGTGCGCGAAGC
CATCGAGGCCCTGGACCAATGGCTGGACGGCCTGCCCCCGAAGGTGCGGCAGGCCTTCTTGCTGCGCCGGCTCGACGGCC
TCAAGCACGCCGAGATCGCCGAGGCCATGGGCGTGTCCATTGCCACGGTGGAGCGCTACATGAAGCAGGCCCTGGTGCAC
CTGTACCTGTCGCCGCAGGCATCCCACGGCTGA

Protein sequence : 
MPSPSTADPVHTLYVAHHDWLHGWLRRKLGNSHQAEDLAHDTFERVVASRQAHAIQEPRAYLTTLAQRVLYNFWRRRELE
QAWLDALATLPEEVAPSPEDYALVREAIEALDQWLDGLPPKVRQAFLLRRLDGLKHAEIAEAMGVSIATVERYMKQALVH
LYLSPQASHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-32 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_4741 YP_004490069.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 6e-33 45