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Name : DelCs14_5693 (DelCs14_5693) Accession : YP_004491018.1 Strain : Delftia sp. Cs1-4 Genome accession: NC_015563 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 6404294 - 6406216 bp Length : 1923 bp Strand : + Note : KEGG: dac:Daci_0838 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAACCGATATCCGGTCTGGAAGTACGCGATCATCGTGATCGCGCTGCTGGTGGGGGTGCTCTACACCCTGCCCAATTT TTTCGGTGAGGCGCCTGCGGTGCAGGTCTCCTCGGCCAAGGCCACCGTCAAGGTGGACAACGCGGTGCTGCACAGGGTCG AAGAGGCCTTGAAGGCTGCCGATGTCAAGCCCGATGTGCTGACCATCGAGGGCACCTCGGTGCGGGCGCGCTTCAACACG CCCGACGAGCAGCTCAAGGCCAAGGACGTGATCCAGAAGGCCCTGATCCCCGATGCCAACGATCCGGCCTACATCGTGGC GCTGAACCTGGTGTCGCGCTCGCCGCAATGGCTCACGGCCGTCGGCGCCAAGCCCATGTACCTGGGCCTGGACCTGCGCG GTGGCGTGCACTTCATGCTGCAGGTGGACATGGCTGCGGCCCTGACCAAGAAGGCCGACTCCTTTGCCGGCGACCTGCGC ACCTCGCTGCGCGACAAGAACATCCGCCACGGCGGCGTCTCGCGCAACGGCAACACCGTCGAGATCCGCGTGCGCGACGA GGCCATGCTCACGGCCGCACGCAATCTGGTCACCGACCAGTTCCCCGATCTGGCGGCCACCTCCGAGCCTGATGGCGCCG GCTTCAAGCTGCTGGCCTCCATCAAGCCCGAAGCCCTGCGCAAGGTGCAGGAGCAGGCGCTCAAGCAGAACATCGTCACC CTGCACAACCGTATCAACGAGCTGGGCGTGGCCGAGCCCGTGATCCAGCAGCAGGGTCTGGACCGCATCATCGTCCAGCT GCCCGGCGTGCAGGACACGGCCAAGGCCAAGGACATCCTGGGCCGCACGGCCACGCTGGAAGTGCGCCTGGTCGACGAAT CCTCCGAGGCGCGCGGCGCCGAGCTGGGCTCGGGCCCCGTGCCCTTCGGCTCCGAGCGCTACCTGGACCGCAACGCCCAG GCCGTGATCGTGCAAAAGCAGGTCGTGCTGACCGGCGAGAACCTCACCGACGCACAGCCCGGCTTCGACAGCCAGACCCA GGAACCCACGGTCAACCTGGTGCTCGATGCCAAGGGCGCGCGCATCTTCAAGGACATCACGCGTGAGAACGTGGGCAAGC GCATGGCCATCATCCTGTTCGAAAAGGGCAAGGGCGAGGTCGTGACGGCTCCCGTGATCCGTACCGAGATCGGTGGCGGA CGCGTGCAGATCTCGGGCCGCATGACCACGGCGGAAGCCAACGACACGGCCCTGCTGCTGCGTGCCGGCTCGCTGGCCGC GCCCATGGAGATCATCGAGGAATACACCATCGGCCCCAGCCTGGGCGCCGACAACATCAACCGCGGCATCCACTCCGTGG TCTGGGGCCTGGTGGCCATCGCGGCCTTCATGTGCGTGTACTACATGCTGTTCGGCGTGATCTCCACGGTGGCCCTGTCG GTCAACGTGCTGCTGCTGCTGGCCATCCTGTCCATGCTGCAGGCCACGCTGACCCTGCCCGGCATCGCCGCCATGGCGCT GGCGCTGGGCGTGGCCATCGACTCCAACGTGCTGATCAACGAGCGCATCCGCGAAGAACTGCGCGGCGGCGTCTCGCCGC AGGCCGCCATCCATGCGGGCTACGAGAACGCATGGCACACCATCCTGGACTCGAACGTGACCACGCTGATCGCGGGCCTG GCGCTGCTGGCCTTCGGCTCCGGCCCGGTGCGCGGCTTCGCCGTGGTGCACTGCATCGGCATCCTGACCAGCATGTTCTC GGCCGTGTTCTTCTCGCGCGGCCTGGTCAACCTCTGGTACGGCCGCCGCAAGAAGCTCAAGAGCATCTCCATCGGCCAGG TCTGGAAGCCGGAAGACACCAGCCAGCTGCGCTCCGTGGCTGCCAAGGGTTCCAGCGTCGCCGATTCCGGCGCCAACAAC TGA Protein sequence : MNRYPVWKYAIIVIALLVGVLYTLPNFFGEAPAVQVSSAKATVKVDNAVLHRVEEALKAADVKPDVLTIEGTSVRARFNT PDEQLKAKDVIQKALIPDANDPAYIVALNLVSRSPQWLTAVGAKPMYLGLDLRGGVHFMLQVDMAAALTKKADSFAGDLR TSLRDKNIRHGGVSRNGNTVEIRVRDEAMLTAARNLVTDQFPDLAATSEPDGAGFKLLASIKPEALRKVQEQALKQNIVT LHNRINELGVAEPVIQQQGLDRIIVQLPGVQDTAKAKDILGRTATLEVRLVDESSEARGAELGSGPVPFGSERYLDRNAQ AVIVQKQVVLTGENLTDAQPGFDSQTQEPTVNLVLDAKGARIFKDITRENVGKRMAIILFEKGKGEVVTAPVIRTEIGGG RVQISGRMTTAEANDTALLLRAGSLAAPMEIIEEYTIGPSLGADNINRGIHSVVWGLVAIAAFMCVYYMLFGVISTVALS VNVLLLLAILSMLQATLTLPGIAAMALALGVAIDSNVLINERIREELRGGVSPQAAIHAGYENAWHTILDSNVTTLIAGL ALLAFGSGPVRGFAVVHCIGILTSMFSAVFFSRGLVNLWYGRRKKLKSISIGQVWKPEDTSQLRSVAAKGSSVADSGANN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-99 | 42 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 8e-99 | 42 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 8e-99 | 42 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 8e-99 | 42 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-99 | 42 |
