Gene Information

Name : DelCs14_0703 (DelCs14_0703)
Accession : YP_004486094.1
Strain : Delftia sp. Cs1-4
Genome accession: NC_015563
Putative virulence/resistance : Virulence
Product : ECF subfamily RNA polymerase sigma-24 factor
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 806710 - 807240 bp
Length : 531 bp
Strand : -
Note : KEGG: dac:Daci_5893 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2

DNA sequence : 
ATGGTGGGGGTCAGCATGTCATCCGGCGAATTCGCGCTGCACAACGAGGTCCAGTCGCTCTATCGTGACCATCACCGATG
GCTGCGCGATTGGCTGCGCAGAAAACTGGGCTGTTCCCACCATGCCGCCGACTTGGCCCACGACACCTTCGTGCGCCTGC
TCGGCCGCAAGGAGCGGGCGGACCCGGTGGACCCCCGCGCCTACCTGGCCACCATCGCCCACGGCCTGGTGGTGGATTTC
CACCGGCGCCGGGCGCTGGAGCGGGCCTATCTGGAATCGCTGGCGGCCCTGCCCGAGCCGCAGGCGCCCTCGCCCGAGGC
GCGGGCCATCGTGCTGGAGGCCCTGGTGGCCATCGACGCCATGCTCGACGGCATGAAGCCCGCCGTGCGCCAGGCCTTCA
TCCTCTCCCAGCTCGAAGGCCTGACCTATGCGCAGATCGCCGCGCGGCTGCAGGTGACCGTGCGCACCGTCAACAACTAC
ATGCTCAAGGCGCTGGAGCACTGCTACCTCATCGTGGCAGACGGCGCATGA

Protein sequence : 
MVGVSMSSGEFALHNEVQSLYRDHHRWLRDWLRRKLGCSHHAADLAHDTFVRLLGRKERADPVDPRAYLATIAHGLVVDF
HRRRALERAYLESLAALPEPQAPSPEARAIVLEALVAIDAMLDGMKPAVRQAFILSQLEGLTYAQIAARLQVTVRTVNNY
MLKALEHCYLIVADGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 3e-36 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DelCs14_0703 YP_004486094.1 ECF subfamily RNA polymerase sigma-24 factor VFG1049 Protein 1e-36 51