Gene Information

Name : Desca_0871 (Desca_0871)
Accession : YP_004496662.1
Strain : Desulfotomaculum carboxydivorans CO-1-SRB
Genome accession: NC_015565
Putative virulence/resistance : Resistance
Product : ectoine/hydroxyectoine ABC transporter ATP-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : 3.6.3.28
Position : 962635 - 963432 bp
Length : 798 bp
Strand : -
Note : SMART: ATPase, AAA+ type, core; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, ATP-binding protein; KEGG: drm:Dred_1375 ABC transporter related; PFAM: ABC transporter-like

DNA sequence : 
TTGATTAAGGCCGAGAGCATCAGTAAAAGCTTCGGTAAACTGGAAGTATTAAAAGAAATCAGTCTGGAAGTGAAGCAAGG
TGAAGTGGTGGCCATCATTGGTCCCAGCGGTTCCGGCAAAAGTACTTTCCTCCGCTGCATTAACCATCTGGAGTCTATTG
ACAGTGGCAACGTTTATTTTGATGGCCAACCGATTGGTTTTAAGCAGTTGCCCAACGGTAAAAAAGCTCCCATTAAAGGT
AAAGAGCTGTGCCAGTTAAGAAGCCAAATCGGCATGGTGTTTCAAAAATTTAACCTATTCCCTCATATGACCGCCCTGGA
AAATGTGATGGAAGGACCAATTACAGTTTTAGGTAAGTCCAAAACTGAAGCCAGAGACCTGGCTGAAGAATTGTTAGCCA
AGGTTGGCCTGGCCGACAAAGCAGAGAATTACCCCAGCCAGCTATCGGGTGGGCAACAGCAGCGGGTGGCCATAGCACGT
GCGCTGGCCATGAAACCAAAAGTAATGCTGTTTGACGAACCCACCAGTGCTTTAGACCCCGAGCTGGTTGGTGAAGTTCT
CAATGTGATGAAAAACTTAGCCAATGAGGGCATGACTATGATCGTAGTAACCCATGAAATGGGCTTCGCCCGGGAAGTAG
CCGACCGGGTAGTGTTTATGGATGACGGTAAGATCTTGGAGATAGGTAAGCCTGAAAACATCTTCACGTCCCCTAAACAC
CCCAGAACCAAGGATTTCCTACGCAGTGTCCTGCGTGGCTATGAGCCGATGACCTATCCCCAGGTGGCTAACATATAA

Protein sequence : 
MIKAESISKSFGKLEVLKEISLEVKQGEVVAIIGPSGSGKSTFLRCINHLESIDSGNVYFDGQPIGFKQLPNGKKAPIKG
KELCQLRSQIGMVFQKFNLFPHMTALENVMEGPITVLGKSKTEARDLAEELLAKVGLADKAENYPSQLSGGQQQRVAIAR
ALAMKPKVMLFDEPTSALDPELVGEVLNVMKNLANEGMTMIVVTHEMGFAREVADRVVFMDDGKILEIGKPENIFTSPKH
PRTKDFLRSVLRGYEPMTYPQVANI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desca_0871 YP_004496662.1 ectoine/hydroxyectoine ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-35 48