Gene Information

Name : SerAS12_3000 (SerAS12_3000)
Accession : YP_004501426.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 3196750 - 3197703 bp
Length : 954 bp
Strand : -
Note : PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: spe:Spro_2917 transcriptional regulator CysB-like protein

DNA sequence :
ATGAACTTTCAACAACTAAAAATTATTCGTGAATCGGCGCGTTGCAACTACAACCTGACCGAGGTCGCCAACACGTTATT
TACCTCGCAATCTGGGGTTAGCCGTCATATTCGTGAGCTGGAAGAAGAGCTGGGCATTGAGATATTTATCCGCCGCGGGA
AGCGTTTATTGGGCATGACCGAACCGGGTAAAGAGTTGTTGGTGGTGGCTGAACGTATCCTGAATGATGCCAATAATATT
CGCCGCCTGGCAGACGTATTCAGCAGCAACGACTCCGGTCAACTGCATATCGCTACGACTCATACTCAGGCACGTTACAG
CCTGCCGGGGGTGATTAAAGAGTTCCGTGCGTTATATCCGCGGGTGAGAGTGGTGCTGAACCAAGGCAGCCCGGAGGAAA
TTGTCGCCATGCTGGCTTCCGGCGAAGCCGATATCGGTATTGCCAGCGAGCGGTTGATGAGCGACGAATCGTTGGCGGCG
TTTCCCTACTACCGCTGGCATCACACCATACTGGTGCCGGAAGGGCATGAGTTGACGCGTCAGCCACAGGTCACGCTGGA
GATGCTCAGCACGCTGCCGCTGATCACCTACCGGCAGGGCATTACCGGCCGTTCACGGCTGGATGCCGCCTTCAAGGCCG
CTGGCCTGACGCCGGATATCGCTCTGAGCGCACAGGATTCCGACGTGATTAAAACCTATGTCGAGTTGGGGTTGGGGGTG
GGCGTATTGGCGGATATGTCGTATGAGAAAGAGCGCGACCACGGCCTGGTCAGCCTTAATGCCGAGCACCTGTTCGAACC
CAATACCGTGTGGTTGGGGTTGAAACGCAGCCAGTTACAACGTAACTATGCCTGGCGGTTTATCCAGCTGTGCAACCCGA
CGCTGTCACTGACCGAAATCAAGGACAAAGTATTCTCCTCACAGTTGGATGCGGTGATCGACTACCAGATTTGA

Protein sequence :
MNFQQLKIIRESARCNYNLTEVANTLFTSQSGVSRHIRELEEELGIEIFIRRGKRLLGMTEPGKELLVVAERILNDANNI
RRLADVFSSNDSGQLHIATTHTQARYSLPGVIKEFRALYPRVRVVLNQGSPEEIVAMLASGEADIGIASERLMSDESLAA
FPYYRWHHTILVPEGHELTRQPQVTLEMLSTLPLITYRQGITGRSRLDAAFKAAGLTPDIALSAQDSDVIKTYVELGLGV
GVLADMSYEKERDHGLVSLNAEHLFEPNTVWLGLKRSQLQRNYAWRFIQLCNPTLSLTEIKDKVFSSQLDAVIDYQI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cbl YP_853089.1 transcriptional regulator Cbl Not tested PAI IV APEC-O1 Protein 2e-94 68