Gene Information

Name : SerAS12_3180 (SerAS12_3180)
Accession : YP_004501605.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Resistance
Product : MATE efflux family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 3381393 - 3382862 bp
Length : 1470 bp
Strand : -
Note : KEGG: spe:Spro_3106 hypothetical protein; TIGRFAM: Multi antimicrobial extrusion protein MatE; PFAM: Multi antimicrobial extrusion protein MatE

DNA sequence :
TTGAATTTACTTGCCGCCCTGCGTCAGCGCGTGGAAAAAACGCCCTGGTATGCCAAACGAAAAAGCTACCGTGTCCTGTT
CTGGCGTGAGATCACGCCGCTGGCGGTGCCGATCTTTATGGAGAATGCCTGCGTCTTGCTGATGGGGGTGCTAAGCACCT
TCCTGGTGAGCTGGATCGGTAAGGAAGCCATGGCCGGCGTGGGGCTGGCGGACAGCTTCAATATGGTGATTATCGCTTTC
TTCGCGGCAGTGGACCTGGGCACCACGGTGGTGGTGGCCTTCAGTCTCGGCAAGCGCGATCGCAAAAGAGCGCGATCGGC
GGCGCGCCAGTCGTTGGTGTTGATGACTCTGGTTGCCCTGGTGTTGGCGGTGGGCATCCATCTGGCGGGCGAGCAGATTA
TTGACGTGATCGCCGGTGCCGCCACCCCGGAGGTCAAGGCATTGGCGCTTTCTTATCTGCAAACCACGGTGTGGAGCTAC
CCGGCCGCCGCCATTGCGCTGATCGGCAGCGGCGCGCTGCGCGGGGCGGGCAATACCAAGATCCCGCTGCTGATCAACGG
CGGCATGAATATCCTTAACATCATCATCAGCAGCATTCTGATCTACGGCATGCTGGGCTGGCATGGACTGGGCTTTGTCG
GCGCTGGGCTGGGGCTGACCATTTCCCGCTATATCGGTGCCATCGCCATTATTTACGTGCTGATGATTGGGTTTACCCCG
GCGCTGCACATCACGCTGAAAAGCTACTTTACGCCGTTAAAGCTGAATATCCTCTGGGAAGTGCTGGGGATCGGCATCCC
CGCCAGCATCGAATCGGTGTTGTTCAACGGCGGCAAATTGCTGACCCAGATGTTTGTCGCCGGCATGGGGACCAACGTCA
TTGCCGGTAATTTTATTGCCTTTTCCATCGCCTCGTTAATTAACCTGCCGGGCAACGCCCTGGGATCGGCGTCGACCATT
ATCGTGGGAAAACGGTTGGGGAAAGGGCAGATAGCCCAGGCGGAGCGGCAACTGCGCCATATTTTCTGGCTGGCGACGAT
TGGACTGACGGTTATCGCCTGGGGAACGGCGCCGCTGGCCGGGGTGTTCGCCTCGTTTTATAGCCAGCAGGACGATGTTA
AAGAGGTGGTGAAAGTGCTTATCTGGCTCAACGCCGCCTTTATGCCGATCTGGGCCGCCTCCTGGGTGCTGCCCGCCGGG
TTGAAAGGTGCGCGCGACGCCCGCTTTGCCATGTGGGTGTCGATGCTGGGCATGTGGGGTTGCCGCGTGGTGGCGGGTTA
CACGCTGGGCATTGTGTTGGGCATGGGCGTGGTCGGCGTTTGGCTCGGCATGTTTATGGATTGGGCGGTGCGCGGTGCGC
TCTTCTACTGGCGCATGGTCAGCGGACGTTGGTTGTGGAAATACCCGCGTAGAAAACAGGCAAAGGTTGCGGAAAAGGCA
ATCCCCCGCGCCAGACGAACGGGGGGCTGA

Protein sequence :
MNLLAALRQRVEKTPWYAKRKSYRVLFWREITPLAVPIFMENACVLLMGVLSTFLVSWIGKEAMAGVGLADSFNMVIIAF
FAAVDLGTTVVVAFSLGKRDRKRARSAARQSLVLMTLVALVLAVGIHLAGEQIIDVIAGAATPEVKALALSYLQTTVWSY
PAAAIALIGSGALRGAGNTKIPLLINGGMNILNIIISSILIYGMLGWHGLGFVGAGLGLTISRYIGAIAIIYVLMIGFTP
ALHITLKSYFTPLKLNILWEVLGIGIPASIESVLFNGGKLLTQMFVAGMGTNVIAGNFIAFSIASLINLPGNALGSASTI
IVGKRLGKGQIAQAERQLRHIFWLATIGLTVIAWGTAPLAGVFASFYSQQDDVKEVVKVLIWLNAAFMPIWAASWVLPAG
LKGARDARFAMWVSMLGMWGCRVVAGYTLGIVLGMGVVGVWLGMFMDWAVRGALFYWRMVSGRWLWKYPRRKQAKVAEKA
IPRARRTGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-130 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_3180 YP_004501605.1 MATE efflux family protein BAC0146 Protein 6e-144 84