Gene Information

Name : SerAS12_3624 (SerAS12_3624)
Accession : YP_004502041.1
Strain : Serratia sp. AS12
Genome accession: NC_015566
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4771
EC number : -
Position : 3866691 - 3868970 bp
Length : 2280 bp
Strand : +
Note : KEGG: spe:Spro_3430 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel

DNA sequence :
ATGAACCGCAAACTTTCACGTTATTCTTTAGCCACACTCATCGGGTTAGGGTTAGGCGCGTCCGCCTTTGCGCACGCCGC
ACAGCAAACTGATACCACCGCAGAAACCGATACCGCCGCCAAAAGCAAAAAAGAAGCCGCCGAGGACACCATTGTCGTCA
CCGCTGCCAGACAGAACCTGCAGGCTCCGGGGGTATCCACCATCACCGCCGACGAAATCAAAAAACGCCCTCCGGCGCGC
GATATCAGCGAACTGATCCGTACCATGCCCGGCGTTAACCTGACCGGCAACTCCACCAGCGGCCAGCGCGGCAACAACCG
CCAGATCGATATTCGCGGCATGGGCCCGGAAAACACCCTGATTCTGATCGACGGTATTCCTGCCAGCAGCCGCAACTCGG
TGCGCCAGGGGTGGCGCGGCGAACGTGACACCCGCGGCGATACCGCCTGGGTGCCACCGGAGATGATCGAACGAATCGAG
GTGTTGCGCGGCCCGGCCGCTGCACGCTATGGCAACGGCGCCGCCGGCGGCGTGGTCAATATCATCACCAAAAAGAGCAC
CAAAGATCTGCACGGCTCGCTGAACACTTATTTCAACGTGCCGCAGCATAAGCAGGAAGGCTCCACCAAGCGCACCGACT
TCAGCCTGTCCGGCCCGCTGAGCGACCAGTTGAGCTTCCGTCTGTTCGGCGGCTACAGCAAAACGCAGGCCGACGCCTGG
GATATTAACGAATCGCACAAATCCGAACGCGTAGGCGCTTATGCCAGCAGCATTCCCTCCGGGCGTGAAGGGGTGGTCGA
CAAAAACATCGACGCCCTGCTGCACTGGGACTTCGCTCACTTGCAGTCGCTGGAGTTTGAATATTCCTATGGCCGCCAGG
GCAACCTGTACGCAGGCGATACGCAAAACACCAACACCAACGCGCTGGTACAAAGCAACTACGGCAAAGAGACCAACCGC
ATCTACCGCGAAACCTTCGGCCTCAACCATCGCGGCGCCTGGGACAACGGCGTCGGCACCAACAATTACATTCGGTTCGA
GCGCACGCGTAATACGCGTCTGAACGAAGGTTTGGCCGGCGGCACCGAAGGTATTTTCGACACCAAAAATGAAGGCTTCG
GCACCACCAAATTGGACGATTTTCTGGCGCACAGCGAAGTCAGCGTGCCGTTTGAATTGGGCGTCACGCAAACCGCCACT
CTGGGCACCGAGTGGAACCAGCAGCGCATGAAGGATGGCACGTCAACCAGCCAAACGCTGATGGGCGGTACCATCCCAGG
CACAGAGACCGGTACCCGTAGCCCTTACGCTTCGGCGAATATCTTCTCGCTGTTCGCCGAAGACAATATCGAGCTGACCG
ACAGCACCATGCTGACTCCCGGCCTGCGTTACGATCACCATTCCGAGGCCGGCAATAACTGGAGCCCGGCGCTAAACCTG
TCGCAAGAGTTGGGTGACAACTTCACGCTGAAAATGGGCATCGCCCGCGCCTACAAAGCGCCGACGCTGTTCCAGACCAA
CCAAAACTATTTGCTGTACAGCAAGGGGCAAGGTTGTGCGGCCAGCGATACCAAAAATGGCTGCTATCTGCTCGGCAACG
ACGATCTGAAGGCGGAAAACAGCATCAACAAAGAGATCGGGCTGGAGTTCCATAATGAAGGCTGGCTGGCCGGGGTGACC
TACTTCCGCAACGATTACCGCAATAAGATCGAAGCGGGCAACAGCAAAATCGCCACCAGCAGCACAGGTACGACGGTTTA
TCAGTGGGAAAACGTGCCGAAAGCGGTCGTACAGGGCCTGGAAGGTACACTGAACGTACCGGTCAGCGAGACCCTTTCCT
GGAGCAACAACGCCACCTACATGATCGAGAACAAGAACAAGAGCACCGGCGATTATCTGTCGGTGATCCCTAAATTCACT
ATCAACTCGACGCTGAGCTGGCAGGCGACCCAGGAACTGTCAATGCAATCGACCCTGACCTGGTACGGCCGCCAGAAGCC
GAAGAAGTACAACTATCAGGGCAAACCGGCGACCGGCAGCGAAACCCGCGAGGTCAGCCCTTACGCCATCGTCGGCGCCA
GCGCCACCTATGACGTCACCAAAAACGTCAGCGTCACCGCCGGCATCGACAACCTGTTCGACAAACGCCAGTTCCGCGCC
GGCAACGCGCAAAACGTTGGCGATCCCAACACCGGTGCCATCAACATCGCCGGAGCGGGTGCTGCAACCTACAACGAACC
GGGCCGCACTTATTATATGAGCATCAACACGCATTTCTGA

Protein sequence :
MNRKLSRYSLATLIGLGLGASAFAHAAQQTDTTAETDTAAKSKKEAAEDTIVVTAARQNLQAPGVSTITADEIKKRPPAR
DISELIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGIPASSRNSVRQGWRGERDTRGDTAWVPPEMIERIE
VLRGPAAARYGNGAAGGVVNIITKKSTKDLHGSLNTYFNVPQHKQEGSTKRTDFSLSGPLSDQLSFRLFGGYSKTQADAW
DINESHKSERVGAYASSIPSGREGVVDKNIDALLHWDFAHLQSLEFEYSYGRQGNLYAGDTQNTNTNALVQSNYGKETNR
IYRETFGLNHRGAWDNGVGTNNYIRFERTRNTRLNEGLAGGTEGIFDTKNEGFGTTKLDDFLAHSEVSVPFELGVTQTAT
LGTEWNQQRMKDGTSTSQTLMGGTIPGTETGTRSPYASANIFSLFAEDNIELTDSTMLTPGLRYDHHSEAGNNWSPALNL
SQELGDNFTLKMGIARAYKAPTLFQTNQNYLLYSKGQGCAASDTKNGCYLLGNDDLKAENSINKEIGLEFHNEGWLAGVT
YFRNDYRNKIEAGNSKIATSSTGTTVYQWENVPKAVVQGLEGTLNVPVSETLSWSNNATYMIENKNKSTGDYLSVIPKFT
INSTLSWQATQELSMQSTLTWYGRQKPKKYNYQGKPATGSETREVSPYAIVGASATYDVTKNVSVTAGIDNLFDKRQFRA
GNAQNVGDPNTGAINIAGAGAATYNEPGRTYYMSINTHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iroN CAC43424.1 IroN protein Virulence PAI III 536 Protein 3e-158 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SerAS12_3624 YP_004502041.1 TonB-dependent siderophore receptor VFG0923 Protein 0.0 72
SerAS12_3624 YP_004502041.1 TonB-dependent siderophore receptor VFG0935 Protein 2e-158 50
SerAS12_3624 YP_004502041.1 TonB-dependent siderophore receptor VFG1650 Protein 2e-158 50