|
Name : SerAS12_0569 (SerAS12_0569) Accession : YP_004499033.1 Strain : Serratia sp. AS12 Genome accession: NC_015566 Putative virulence/resistance : Unknown Product : AraC family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 635421 - 636317 bp Length : 897 bp Strand : + Note : TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein hpaA; PFAM: Helix-turn-helix, AraC type; KEGG: spe:Spro_0633 AraC family transcriptional regulator; SMART: Helix-turn-helix, AraC domain DNA sequence : GTGCAGAAAAGTACCGGTTTTATCGCCAATATCGACATCTGCAAAGAGTACGATGCGCGCTACGCCACCGATGAGGTGCA TTACGAAACCTTCGCCGGGCTGGCGGCGTTTTTTGGCCGCGACATGCAGGTGCACTGGCACGACCGTTTCTTCCAGGTGC ATTTTCTGGAGACCGGCAAGATTGAGCTGCAGCTGGACAGCCAGCACTATTCGGTGCAGGCGCCGCTGTTTATCCTGACG CCGCCCTCGGTGCCGCATGCGTTCTTCACCGAGCCGATCAGTGACGGCCACGTGCTGACGGTGCGCCAGGAGCTGATTTG GCCGCTGCTGGAGCGGCTGTACCCCGGCAGCAATCTGGCGCTCGATATGCCGGGCATCTGTCTGTCGATGGCGGACGCCC CGCAGGAGTTGACGGCGCTGAGCCATTACTGGGCGCTGATCCGCCGTGAATTCGGCCAGCAACTGGCCGGCCGCGAGCAG ACTCTGGCGCTACTGGCGCAAGCGGTGTTTACCCTGCTGTTGCGTAATGCCGCGTTGGAAGATACCGCCACCAGCGGGGT GCGCGGCGAACTGAAATTGTTCCAGCGTTTCAATAAAATGGTGGATGAACGCTTCCGCGACCACCTGCCGGTGCCGGACT ATGCGCAGGCGTTGGGAGTGACCGAATCACGGCTAAACGATCTGTGCCGCCGCTTCGCCAACCAGCCCCCCAAACGGCTG ATCTTCGACAGGTTGCTGCGCGAAGCCAAGCGCATGCTGCTGTTCAGCGCCTGTAGCGTGCATGAGACCGCTTATAGCCT CGGGTTCAAGGACCCGGCCTATTTCGCCCGTTTTTTCAATCGTCTGGAAGGCTGCTCGCCTTCGACCTACCGCGCCGCAC AACATCCCCTTTCGTAA Protein sequence : MQKSTGFIANIDICKEYDARYATDEVHYETFAGLAAFFGRDMQVHWHDRFFQVHFLETGKIELQLDSQHYSVQAPLFILT PPSVPHAFFTEPISDGHVLTVRQELIWPLLERLYPGSNLALDMPGICLSMADAPQELTALSHYWALIRREFGQQLAGREQ TLALLAQAVFTLLLRNAALEDTATSGVRGELKLFQRFNKMVDERFRDHLPVPDYAQALGVTESRLNDLCRRFANQPPKRL IFDRLLREAKRMLLFSACSVHETAYSLGFKDPAYFARFFNRLEGCSPSTYRAAQHPLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaA | AAO17187.1 | HpaA | Not tested | tcd island | Protein | 1e-99 | 69 |
