Gene Information

Name : SerAS9_1159 (SerAS9_1159)
Accession : YP_004504560.1
Strain : Serratia plymuthica AS9
Genome accession: NC_015567
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1270891 - 1271100 bp
Length : 210 bp
Strand : +
Note : KEGG: ypb:YPTS_1144 cold shock protein CspE; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGTCTAAGATTAAAGGTAGCGTTAAGTGGTTTAATGAATCCAAAGGCTTCGGCTTCATTACTCCGGAAGATGGTAGCAA
GGACGTTTTCGTTCACTTCTCTGCCATCGCTAGCAATGGTTTCAAAACTCTTGCTGAAGGCCAGCGTGTAGAATTTGAAA
TCACGAACGGTGCCAAAGGGCCATCTGCTGCTAACGTTATCGCTATCTAA

Protein sequence :
MSKIKGSVKWFNESKGFGFITPEDGSKDVFVHFSAIASNGFKTLAEGQRVEFEITNGAKGPSAANVIAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-18 75
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 6e-07 49