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Name : Metme_2346 (Metme_2346) Accession : YP_004513246.1 Strain : Methylomonas methanica MC09 Genome accession: NC_015572 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2559059 - 2561008 bp Length : 1950 bp Strand : - Note : KEGG: gca:Galf_1768 cytochrome c-type biogenesis protein CcmF; TIGRFAM: Cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein DNA sequence : ATGATTCCCGAAATCGGTCACTTTGCCCTGATTTTGGCCTTGTGCATGGCCGTCGTGCAAGGCACGTTACCGCTGGTTGG CGCGTCAAAAGGCATCGCCGGTTGGGTGCATGTCGCCAAACCTGCGGCATTCGGGCAATTGCTATTCATGGCTATCGCTT ACGGCTGTTTGACCTACAGCAGTATCGTGCACGATTTTTCCGTGGCTTATATCGCCCAAAACTCCAATACCGGTTTGCCG TTTATTTATCTGGTGTCCGGCGTATGGGGTGCGCATGAAGGCTCTCTGTTGCTATGGGCCTTGACCTTGTCTATCTGGAC AGGCTTGGTAGCGATGTTCAGCAAGCATATTCCGGATGCCACCCGTGCCAGGGTATTGGGTGTAATGGGGCTGGTCAGCG TCGGTTTTATTCTGTTCCTGCTGTTCACTTCCAATCCGTTTGCCCGCCTGTTCCCGGCTCCTGCCGAAGGCCGGGATTTA AACCCCTTATTGCAAGACCCCGGTCTGGCCATTCATCCGCCCATGCTGTACATGGGCTACGTGGGTTTCTCCGTGGCGTT CGCTTTTTCGATTGCCGCCCTAATCGAAGGCAAACTCGATGCGGCCTGGGCACGCTGGTCGCGGCCCTGGACCAGTATAG CCTGGATGTTTTTGACAATCGGTATCACCTTGGGCAGTTGGTGGGCGTATTACGAATTGGGGTGGGGCGGCTGGTGGTTC TGGGATCCGGTGGAAAACGCGTCTTTCATGCCCTGGCTGGTCGGTACCGCATTGATTCATTCGCTGGCGGCCACCGAAAA ACGCGGGGTATTTAAAACCTGGACTGTGTTGTTGGCAATATTTGCCTTTTCCCTAAGTTTGCTGGGGACGTTTTTGGTGC GTTCCGGCGTATTGACCTCGGTGCATGCTTTTGCCAGTGACCCGGCGCGCGGGGTATTTATTCTGGTATTTTTAGCCGTG GTTGTAGGCGGCTCGTTACTGCTGTATGCAATTCGGGCGCCGCAGGTCAAAAGCAGCGCCAGTTTCGAATTGGTGTCGCG CGAATCGGTGTTATTAATTAACAATGTGCTATTGGTGGTAACGGCGGCCAGTATTTTATTAGGTACCTTATACCCCTTGG TAATCGATGCCTTGGGCTTGGGCAAATTGTCAGTGGGTCCGCCGTATTTCAACGCGGTGTTTATCCCGCTAATGGCGCCC TTGGCGATTGTGGTGGGTTTCGGCATGTTATTGCATTGGAAACGTGACGAATTAAAGACATTGTCAAAATCGGTATGGCT AATAGCGGTTGTCTGTATTGCCGTTGCCGGCTTATTGCCTTTGCTGATGCCGTTTTATTCCTGGGCGGCGGTATTGGGTT TAAGTCTGGCCCTGTGGACGTTGGCGGTCACCGGGTTTGCTTTTAAACAACGCTTGCAAAATTGGTCGTTCGAGCGATTG AAACAAATTCCCGCCGGTTTTTACGGCATGACCGTGGCGCATGTCGGTATCGCAGTGTTCGTGGTCGGCATTACCATGAC CTCAGTGTATAGCATAGAACGCGATGTGCGCATGGCACCCGGCGATACGCTGGATATGTTCGGTTATATCTTTAACTTTC ATGGCGTCAAGCAAACCGAAGGCCCCAATTACCGGGCTGAGCAGGGTTATCTGACCGTAACGCACGATGGAGAAACCGTG GCGGAATTATCCCCGCAAAAACGGGTGTACCGGGTGCAAACCATGCCCATGACCGAAGCCGCAATCGATGCCGGCTTGTT CCGCGATTTGTTTGTGGCAATTGGCGAACCCTTGGGCGAAGAGGGGGCCTGGAGTTTGCGCGTCTATTATAAATCCTTTA TTCGCTGGATCTGGATGGGCGGCGTGTTCATGGCCGTGGGCGGTTTGTTAGGCGCCATGGATAGACGCTATCGAATGCTC AACAAAAAAGCGGTGCTCGCGCATGCTTAA Protein sequence : MIPEIGHFALILALCMAVVQGTLPLVGASKGIAGWVHVAKPAAFGQLLFMAIAYGCLTYSSIVHDFSVAYIAQNSNTGLP FIYLVSGVWGAHEGSLLLWALTLSIWTGLVAMFSKHIPDATRARVLGVMGLVSVGFILFLLFTSNPFARLFPAPAEGRDL NPLLQDPGLAIHPPMLYMGYVGFSVAFAFSIAALIEGKLDAAWARWSRPWTSIAWMFLTIGITLGSWWAYYELGWGGWWF WDPVENASFMPWLVGTALIHSLAATEKRGVFKTWTVLLAIFAFSLSLLGTFLVRSGVLTSVHAFASDPARGVFILVFLAV VVGGSLLLYAIRAPQVKSSASFELVSRESVLLINNVLLVVTAASILLGTLYPLVIDALGLGKLSVGPPYFNAVFIPLMAP LAIVVGFGMLLHWKRDELKTLSKSVWLIAVVCIAVAGLLPLLMPFYSWAAVLGLSLALWTLAVTGFAFKQRLQNWSFERL KQIPAGFYGMTVAHVGIAVFVVGITMTSVYSIERDVRMAPGDTLDMFGYIFNFHGVKQTEGPNYRAEQGYLTVTHDGETV AELSPQKRVYRVQTMPMTEAAIDAGLFRDLFVAIGEPLGEEGAWSLRVYYKSFIRWIWMGGVFMAVGGLLGAMDRRYRML NKKAVLAHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-158 | 57 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 2e-136 | 55 |
